Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF2492 and GFF2493 are separated by 12 nucleotidesGFF2493 and GFF2494 are separated by 95 nucleotidesGFF2494 and GFF2495 are separated by 19 nucleotidesGFF2495 and GFF2496 are separated by 62 nucleotides GFF2492 - BUG/TctC family periplasmic protein, at 551,151 to 552,131 GFF2492 GFF2493 - YheO-like PAS domain, at 552,144 to 552,770 GFF2493 GFF2494 - Threonine-synthase-like protein 4, at 552,866 to 554,014 GFF2494 GFF2495 - Ornithine cyclodeaminase (EC 4.3.1.12), at 554,034 to 555,020 GFF2495 GFF2496 - hypothetical protein, at 555,083 to 555,391 GFF2496
Group Condition GFF2492 GFF2493 GFF2494 GFF2495 GFF2496
complex community Community=guar; Passage=4 -0.3 -0.9 -0.3 -0.1 N.D.
complex community Community=Locust bean gum; Passage=4 -0.6 -0.1 +0.2 -0.6 N.D.
complex community Community=Locust bean gum; Passage=4 -0.4 -0.3 +0.3 -0.6 N.D.
complex community Community=guar; Passage=4 -0.3 +0.3 -0.4 -0.5 N.D.
complex community Community=arabino-guar; Passage=4 +0.5 -0.1 -0.6 -0.4 N.D.
complex community Community=Locust bean gum; Passage=4 +0.3 +0.6 -0.3 -1.0 N.D.
complex community Community=Kojac gum; Passage=4 +0.4 -0.6 -0.0 -0.1 N.D.
phage phage_bap4 +0.2 -0.1 +0.1 -0.3 N.D.
phage phage_bap4 +0.2 -0.2 -0.2 -0.0 N.D.
phage phage_bap4 +0.2 +0.1 -0.2 -0.2 N.D.
complex community Community=Locust bean gum; Passage=1 +0.3 +0.1 -0.0 -0.4 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.2 -0.1 +0.0 +0.3 N.D.
complex community Community=arabino-guar; Passage=4 +0.4 -0.3 +0.4 -0.5 N.D.
complex community Community=arabino-guar; Passage=4 +0.4 -0.2 -0.2 -0.0 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL +0.1 +0.2 +0.1 -0.3 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.4 -0.1 +0.1 -0.2 N.D.
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.3 -0.2 +0.0 +0.2 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.4 +0.0 +0.1 -0.3 N.D.
complex community Community=Kojac gum; Passage=1 +0.2 +0.1 -0.2 +0.3 N.D.
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.1 -0.2 +0.3 +0.2 N.D.
phage phage_bap4 +0.4 -0.2 +0.1 +0.2 N.D.
complex community Community=Locust bean gum; Passage=4 +0.2 -0.1 +0.1 +0.3 N.D.
vitamin M9 with Supernatant from Cyptococcus +0.2 +0.2 +0.3 -0.1 N.D.
no phage control no phage control +0.5 +0.1 -0.1 +0.1 N.D.
phage phage_bap4 +0.3 +0.0 +0.0 +0.2 N.D.
complex community Community=guar; Passage=4 +0.5 -0.0 +0.2 +0.0 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.2 +0.3 +0.4 +0.1 N.D.
complex community Community=guar; Passage=4 +0.6 +0.0 +0.5 -0.1 N.D.
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.5 +0.2 +0.2 +0.1 N.D.
complex community Community=arabino-guar; Passage=4 +0.8 +0.0 +0.1 +0.2 N.D.
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