Fitness for 5 genes in Variovorax sp. SCN45

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 61 experiments or choose conditions or try the comparative fitness browser

500 ntGFF2488 and GFF2489 are separated by 127 nucleotidesGFF2489 and GFF2490 are separated by 7 nucleotidesGFF2490 and GFF2491 are separated by 177 nucleotidesGFF2491 and GFF2492 are separated by 16 nucleotides GFF2488 - Two-component transcriptional response regulator, LuxR family, at 547,053 to 548,093 GFF2488 GFF2489 - hypothetical protein, at 548,221 to 548,880 GFF2489 GFF2490 - Transcriptional regulator, LysR family, at 548,888 to 549,808 GFF2490 GFF2491 - Threonine-synthase-like protein 3, at 549,986 to 551,134 GFF2491 GFF2492 - BUG/TctC family periplasmic protein, at 551,151 to 552,131 GFF2492
Group Condition GFF2488 GFF2489 GFF2490 GFF2491 GFF2492
complex community Community=guar; Passage=4 -0.5 -0.0 -0.1 +0.2 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.1 -0.2 -0.6 -0.0 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.1 -0.6 -0.1 +0.0 +0.3
complex community Community=Locust bean gum; Passage=4 -0.1 +0.4 +0.2 -0.2 -0.6
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.1 -0.5 +0.4 -0.1 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.1 -0.3 +0.3 -0.1 -0.2
complex community Community=guar; Passage=4 -0.1 -0.5 -0.1 +0.1 +0.5
complex community Community=Kojac gum; Passage=4 +0.0 -0.1 -0.6 +0.2 +0.4
complex community Community=guar; Passage=4 +0.5 +0.0 -0.3 +0.2 -0.3
complex community Community=Locust bean gum; Passage=4 +0.3 +0.9 -0.5 -0.1 -0.4
vitamin M9 with Supernatant from Cyptococcus -0.3 +0.3 +0.2 -0.0 +0.2
phage phage_bap4 -0.1 -0.3 +0.5 +0.1 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL +0.3 -0.3 +0.2 +0.1 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.2 -0.2 +0.0 +0.1 +0.4
complex community Community=Locust bean gum; Passage=4 +0.3 +0.6 -0.5 -0.1 +0.2
vitamin M9 with Supernatant from Cyptococcus +0.1 +0.3 -0.1 +0.1 +0.2
no phage control no phage control -0.1 +0.2 +0.1 -0.0 +0.5
complex community Community=Kojac gum; Passage=1 -0.0 +0.3 +0.2 +0.0 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.2 +0.3 +0.0 -0.1 +0.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.1 +0.3 +0.0 +0.1 +0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.2 +0.2 +0.3 -0.1 +0.4
complex community Community=Locust bean gum; Passage=1 -0.1 +0.5 +0.3 -0.1 +0.3
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.4 +0.1 +0.1 +0.1 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.3 +0.1 +0.4 +0.1 +0.2
complex community Community=arabino-guar; Passage=4 -0.2 +0.9 +0.1 -0.3 +0.4
complex community Community=arabino-guar; Passage=4 -0.1 +0.1 +0.5 -0.1 +0.8
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.3 -0.0 +0.6 +0.1 +0.2
complex community Community=guar; Passage=4 -0.2 +1.0 +0.2 -0.4 +0.6
complex community Community=arabino-guar; Passage=4 -0.0 +0.2 +0.8 +0.3 +0.4
complex community Community=arabino-guar; Passage=4 +0.5 +0.2 +0.7 +0.3 +0.5
remove
GFF2488
plot		 remove
GFF2489
plot		 remove
GFF2490		 remove
GFF2491
plot		 remove
GFF2492
plot