Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF2482 and GFF2483 are separated by 91 nucleotidesGFF2483 and GFF2484 overlap by 1 nucleotidesGFF2484 and GFF2485 are separated by 13 nucleotidesGFF2485 and GFF2486 are separated by 25 nucleotides GFF2482 - Urease accessory protein UreE, at 539,643 to 540,257 GFF2482 GFF2483 - Urease alpha subunit (EC 3.5.1.5), at 540,349 to 542,067 GFF2483 GFF2484 - Urease beta subunit (EC 3.5.1.5), at 542,067 to 542,372 GFF2484 GFF2485 - Nickel-binding accessory protein UreJ-HupE, at 542,386 to 542,985 GFF2485 GFF2486 - Urease gamma subunit (EC 3.5.1.5), at 543,011 to 543,313 GFF2486
Group Condition GFF2482 GFF2483 GFF2484 GFF2485 GFF2486
complex community Community=Locust bean gum; Passage=4 -3.4 +0.6 -0.9 N.D. +0.0
complex community Community=guar; Passage=4 -2.7 +0.3 -1.1 N.D. +0.7
complex community Community=guar; Passage=4 -3.3 -0.0 +1.2 N.D. -0.4
complex community Community=Kojac gum; Passage=4 -1.7 +0.2 -1.0 N.D. +0.5
complex community Community=Locust bean gum; Passage=4 -0.7 -0.4 -0.8 N.D. +0.4
complex community Community=arabino-guar; Passage=4 -1.8 +0.2 +0.8 N.D. -0.3
phage phage_bap4 -0.4 -0.2 -0.3 N.D. +0.1
complex community Community=arabino-guar; Passage=4 +0.2 -1.0 -1.0 N.D. +1.0
no phage control no phage control -0.9 +0.2 -0.0 N.D. +0.2
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.5 -0.1 -0.3 N.D. +0.3
phage phage_bap4 +0.4 -0.2 -0.3 N.D. -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -1.0 +0.1 +0.3 N.D. +0.4
complex community Community=Locust bean gum; Passage=4 -0.7 -0.5 -0.1 N.D. +1.1
vitamin M9 with Supernatant from Cyptococcus -0.5 -0.2 +0.5 N.D. +0.2
vitamin M9 with Supernatant from Cyptococcus +0.5 +0.2 -0.3 N.D. -0.2
vitamin M9 with calcium pantothenate 10 mg/mL +0.5 +0.1 -0.3 N.D. -0.1
vitamin M9 with calcium pantothenate 10 mg/mL +0.5 +0.3 -0.1 N.D. -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.4 -0.1 -0.4 N.D. +0.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.6 -0.3 -0.1 N.D. +0.3
no phage control no phage control +0.7 -0.0 -0.2 N.D. +0.3
complex community Community=arabino-guar; Passage=4 +1.0 -0.1 -0.4 N.D. +0.3
vitamin M9 with Supernatant from Cyptococcus +1.0 -0.1 -0.0 N.D. +0.2
phage phage_bap4 +0.3 +0.2 +0.4 N.D. +0.3
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.7 +0.1 -0.2 N.D. +0.6
vitamin M9 with Supernatant from Cyptococcus +1.0 +0.3 -0.4 N.D. +0.4
complex community Community=guar; Passage=4 +1.5 -0.4 +0.1 N.D. +0.1
complex community Community=guar; Passage=4 -0.2 +1.2 +0.6 N.D. -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.6 +0.1 +0.2 N.D. +0.6
complex community Community=arabino-guar; Passage=4 +1.3 -0.5 -0.0 N.D. +1.1
complex community Community=Locust bean gum; Passage=4 +1.3 +0.4 -0.1 N.D. +0.4
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