Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

Or view all 554 experiments or choose conditions or try the comparative fitness browser

Group	Condition	PS417_12635	PS417_12640	PS417_12645	PS417_12650	PS417_12655
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.4	-0.3	-0.2	-3.3	-0.3
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.4	-0.3	+0.0	-1.4	-0.8
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.2	+0.1	-0.4	-1.1	-0.3
motility	inner cut, LB soft agar motility assay	-0.4	+0.2	+0.2	-1.0	-0.8
carbon source	2'-Deoxyinosine 5 mM (C)	-0.6	-0.0	-0.1	-1.3	+0.4
carbon source	L-Valine (C)	-0.7	-0.6	-0.1	-0.2	+0.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.3	-0.3	+0.0	-1.4	+0.1
solid stress	Fraxetin 3 mM; solid stress	-0.4	+0.2	-0.1	+0.7	-1.6
solid stress	Fraxetin 2 mM; solid stress	-0.1	+0.0	-0.1	+0.4	-1.4
solid stress	80% Methanol 0.5 mM; solid stress	+0.3	-0.2	-0.2	+0.3	-1.1
agar plate interaction control	Taped volatile agar plate with no fungus	-0.5	-0.6	+0.4	-0.9	+0.8
solid stress	Fraxetin 1 mM; solid stress	+0.0	-0.1	+0.0	+0.7	-1.4
solid stress	Fraxetin 2 mM; solid stress	-0.0	+0.1	+0.1	+0.4	-1.4
phage	JP1 MOI 1	+0.9	-0.2	-0.5	-0.1	-0.8
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.6	-0.6	-0.1	-0.2	+0.8
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.7	+0.0	-0.0	-0.1	-1.2
phage	P. simiae OR Antrim MOI 10	+0.6	+0.1	+0.1	-1.9	+0.6
phage	Wcs_1	-0.0	+0.2	-0.3	-1.1	+0.7
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.6	-0.3	+0.1	-0.4	+0.7
solid stress	Fraxetin 3 mM; solid stress	+0.5	-0.1	+0.2	+0.3	-1.3
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.8	-0.2	-0.3	-0.3	-0.5
phage	P. simiae Grant Run MOI 10	+0.9	-0.2	+0.2	-0.7	+0.2
carbon source	L-Valine (C)	+0.6	-0.0	+0.2	-0.8	+0.7
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.1	+0.5	-0.1	+1.3	-0.8
carbon source	2-Deoxy-D-Ribose 10 mM (C)	-0.4	+0.3	+0.1	+0.6	+0.8
stress	methylglyoxal 0.032 vol%	+0.9	+0.3	+0.4	-0.2	+0.3
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.3	+0.4	+0.1	+1.6	-0.6
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.3	+0.2	+0.0	+1.6	+0.4
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.8	-0.0	+0.0	+0.7	+0.5
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+0.6	+0.5	+0.1	+0.8	+0.4