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Cofit
Protein
Homologs
Fitness for 5 genes in
Variovorax sp. SCN45
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF2476 and GFF2477 are separated by 37 nucleotides
GFF2477 and GFF2478 are separated by 99 nucleotides
GFF2478 and GFF2479 are separated by 142 nucleotides
GFF2479 and GFF2480 are separated by 23 nucleotides
GFF2476 - Tripartite tricarboxylate transporter TctB family, at 535,289 to 535,777
GFF2476
GFF2477 - Tripartite tricarboxylate transporter TctA family, at 535,815 to 537,326
GFF2477
GFF2478 - no description, at 537,426 to 537,950
GFF2478
GFF2479 - hypothetical protein, at 538,093 to 538,272
GFF2479
GFF2480 - Urease accessory protein UreG, at 538,296 to 538,946
GFF2480
Group
Condition
GFF2476
GFF2477
GFF2478
GFF2479
GFF2480
complex community
Community=guar; Passage=4
-0.5
-0.5
-0.7
-0.0
-0.8
complex community
Community=guar; Passage=4
-1.1
-0.6
-0.2
+0.1
+0.2
complex community
Community=arabino-guar; Passage=4
+0.4
-0.3
+0.0
-1.6
+0.0
complex community
Community=Kojac gum; Passage=4
-0.2
-0.7
-0.2
-0.5
+0.2
complex community
Community=Locust bean gum; Passage=4
-0.0
+0.1
-0.2
-0.6
-0.5
complex community
Community=Locust bean gum; Passage=4
-1.1
-0.0
-0.4
+0.6
+0.1
complex community
Community=Locust bean gum; Passage=4
+0.2
-0.5
-0.4
-0.6
+0.4
complex community
Community=arabino-guar; Passage=4
+0.4
-0.9
-0.0
-0.0
-0.3
complex community
Community=Locust bean gum; Passage=1
-0.3
+0.1
+0.1
-0.3
-0.1
complex community
Community=guar; Passage=4
+0.1
-0.7
+0.4
-0.2
+0.0
vitamin
M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL
+0.3
-0.3
-0.1
-0.1
-0.1
complex community
Community=guar; Passage=4
-0.3
-0.5
-0.3
+0.8
+0.2
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
+0.1
-0.0
+0.1
-0.5
+0.2
complex community
Community=arabino-guar; Passage=4
+0.3
-0.6
-0.1
+0.6
-0.3
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
-0.3
-0.3
+0.2
+0.4
+0.0
complex community
Community=Locust bean gum; Passage=4
+0.3
-0.8
-0.3
+0.7
+0.2
phage
phage_bap4
+0.5
-0.0
-0.3
-0.2
+0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
+0.3
-0.1
-0.2
+0.2
+0.0
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
+0.4
+0.1
-0.1
-0.2
+0.2
vitamin
M9 with calcium pantothenate 10 mg/mL
+0.6
-0.1
+0.3
-0.5
+0.1
complex community
Community=arabino-guar; Passage=4
-0.6
+0.2
+0.1
+0.9
+0.0
vitamin
M9 with Supernatant from Cyptococcus
+0.7
+0.1
+0.0
-0.3
+0.0
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
+0.2
+0.0
+0.5
-0.2
+0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
+0.4
+0.0
-0.0
+0.4
-0.1
phage
phage_bap4
-0.1
+0.1
+0.3
+0.4
+0.0
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
+0.4
+0.1
+0.2
-0.1
+0.1
phage
phage_bap4
+0.2
+0.3
+0.2
-0.1
+0.1
phage
phage_bap4
+0.2
+0.0
-0.1
+0.7
+0.1
vitamin
M9 with calcium pantothenate 10 mg/mL
+0.1
+0.2
+0.3
+0.5
+0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
+0.6
-0.1
+0.2
+0.7
-0.1
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