Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_12570	PS417_12580	PS417_12585	PS417_12590	PS417_12595
stress	Spectinomycin 0.4 mg/ml	-0.2	-0.0	-3.7	N.D.	-4.7
stress	Polymyxin B sulfate 0.006 mg/ml	+0.4	-0.3	-5.9	N.D.	-2.7
solid stress	Fraxetin 3 mM; solid stress	-0.1	-0.1	-0.9	N.D.	-4.4
stress	Gentamicin 0.008 mg/ml	+0.6	-0.1	-2.4	N.D.	-2.2
stress	Doxycycline hyclate 0.001 mg/ml	+0.3	-0.2	+1.2	N.D.	-4.4
phage	P. simiae Grant Run MOI 10	-0.5	-0.0	-0.1	N.D.	-2.4
stress	Tetracycline 0.001 mg/ml	+0.0	+0.1	+1.3	N.D.	-4.4
stress	Neomycin 0.04 mg/ml	+0.0	+0.1	-0.9	N.D.	-2.1
solid stress	Fraxetin 2 mM; solid stress	+0.2	-0.0	-0.0	N.D.	-3.0
solid stress	Fraxetin 3 mM; solid stress	+0.2	-0.1	-0.9	N.D.	-1.8
no stress control on plate	growth on LB_noSalt plate	-0.1	+0.2	-1.4	N.D.	-1.2
carbon source	Deoxyribonucleic from herring sperm 10 mg/mL (C)	+0.0	-0.3	+0.3	N.D.	-2.3
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-0.7	-0.4	-3.4	N.D.	+2.3
stress	Nalidixic 0.015 mg/ml	-0.3	+0.0	+1.8	N.D.	-2.8
carbon source	L-Valine (C)	-0.1	+0.1	+0.8	N.D.	-1.8
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	+0.1	-0.4	-2.7	N.D.	+2.4
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	-0.3	-0.2	-1.1	N.D.	+1.3
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	+0.1	-0.4	-1.9	N.D.	+2.1
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	+0.1	-0.2	-1.8	N.D.	+2.1
stress	Nalidixic 0.025 mg/ml	-0.2	+0.2	+2.6	N.D.	-2.5
stress	methylglyoxal 0.032 vol%	-0.2	-0.3	+1.5	N.D.	-0.9
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	+0.6	+0.0	-2.4	N.D.	+2.3
soil	soil sample 4; outgrowth in LB	-0.5	-0.4	+0.6	N.D.	+1.4
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.9	-0.5	-0.2	N.D.	+1.5
soil	soil sample 2; outgrowth in LB	+0.0	+0.5	+0.0	N.D.	+2.5
rhizosphere	rhizosphere sample 2; outgrowth in LB	-1.4	+0.3	+0.7	N.D.	+4.1
root	root sample 6; outgrowth in LB	+0.2	+0.3	+0.7	N.D.	+2.6
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	+1.2	+0.1	+2.3	N.D.	+0.3
in planta	Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+4.0	-0.1	+0.6	N.D.	+0.1
rhizosphere	rhizosphere sample 8; outgrowth in LB	+0.2	+0.2	+0.4	N.D.	+4.8