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Cofit
Protein
Homologs
Fitness for 5 genes in
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF2463 and GFF2464 are separated by 3 nucleotides
GFF2464 and GFF2465 are separated by 10 nucleotides
GFF2465 and GFF2466 are separated by 115 nucleotides
GFF2466 and GFF2467 are separated by 38 nucleotides
GFF2463 - Hypothetical protein, similar to phosphoserine phosphatase, at 83,053 to 83,688
GFF2463
GFF2464 - PTS system, IIB component (EC 2.7.1.69) / PTS system, IIC component (EC 2.7.1.69), at 83,692 to 85,053
GFF2464
GFF2465 - N-acetylmuramic acid 6-phosphate etherase, at 85,064 to 85,957
GFF2465
GFF2466 - Sialic acid utilization regulator, RpiR family, at 86,073 to 86,921
GFF2466
GFF2467 - 2-dehydropantoate 2-reductase (EC 1.1.1.169), at 86,960 to 87,877
GFF2467
Group
Condition
GFF2463
GFF2464
GFF2465
GFF2466
GFF2467
phage
LB_plus_SM_buffer with ES18h1_phage 0.75 MOI
+0.3
+0.1
-0.0
-3.9
+0.4
phage
LB_plus_SM_buffer with ES18h1_phage 0.00075 MOI
-0.4
+0.3
-0.3
-2.6
+0.0
phage
LB_plus_SM_buffer with 6D2_phage 15 MOI
+0.1
+0.0
-0.0
-2.3
-0.1
phage
LB_plus_SM_buffer with FelixO1_phage (wt_new) 2 MOI
-0.4
-0.1
+0.0
-1.0
-0.2
phage
Br60_phage 15 MOI
-0.9
+0.0
-0.2
-0.3
-0.2
phage
LB_plus_SM_buffer with S16_phage 15 MOI
+0.2
-0.3
+0.4
-1.6
-0.2
phage
LB_plus_SM_buffer with FelixO1_phage (wt_new) 2 MOI
-0.2
-0.4
+0.3
-0.7
-0.2
phage
LB_plus_SM_buffer with FelixO1_phage 0.05 MOI
-0.1
+0.2
+0.1
-1.2
-0.2
phage
LB_plus_SM_buffer with FelixO1_phage 0.5 MOI
+0.1
+0.0
+0.6
-1.7
-0.0
phage
LB_plus_SM_buffer with 8C2_phage 15 MOI
+0.5
-0.1
-0.1
-1.2
-0.2
phage
LB_plus_SM_buffer with FelixO1_phage (old) 15 MOI
-0.2
-0.2
+0.2
-0.5
-0.3
phage
LB_plus_SM_buffer with FelixO1_phage (LP_new) 15 MOI
+0.2
-0.4
+0.2
-0.5
-0.3
phage
LB_plus_SM_buffer with EIP16_phage 8.75 MOI
+0.1
-0.3
+0.3
-0.5
-0.2
phage
LB_plus_SM_buffer with 6F2_phage 0.001875 MOI
-0.3
+0.1
+0.1
-0.7
+0.2
phage
LB_plus_SM_buffer with 6F2_phage 0.1875 MOI
-0.5
+0.3
+0.5
-0.7
+0.0
phage
LB_plus_SM_buffer with 8C2_phage 15 MOI
+0.6
-0.3
-0.1
-0.4
-0.0
phage
LB_plus_SM_buffer with S16_phage 15 MOI
+0.5
-0.2
+0.3
-0.2
-0.4
phage
6F2_phage 15 MOI
+0.8
+0.2
+0.1
-1.0
+0.1
phage
6F2_phage 15 MOI
+0.7
+0.1
-0.4
-0.2
+0.0
phage
LB_plus_SM_buffer with P22_phage 15 MOI
+0.9
-0.1
+0.1
-1.0
+0.5
phage
LB_plus_SM_buffer with Br60_phage 0.0005 MOI
-0.1
-0.3
-0.1
+0.9
+0.1
phage
phi19h1_phage 15 MOI
+0.0
-0.2
+0.0
+0.9
-0.2
phage
phi19h1_phage 15 MOI
+0.2
-0.1
+0.0
+0.8
-0.2
micoeukaryotes
Acanthamoeba sp., muxed culture-2
-0.1
+0.1
+0.1
+1.0
-0.0
phage
6F2_phage 15 MOI
-0.1
+0.3
+0.4
+0.2
+0.4
phage
LB_plus_SM_buffer with 6C2_phage 0.25 MOI
+0.3
-0.1
+0.5
+0.7
-0.1
phage
LB_plus_SM_buffer with 6H2_phage 0.5 MOI
+0.1
-0.1
+0.1
+1.2
-0.2
micoeukaryotes
C.elegans, mixed culture-1
+0.5
+0.2
+0.2
+0.5
+0.1
phage
6H2_phage 10 MOI; agar plate assay
+0.0
-0.2
+0.4
+1.8
+0.4
phage
Ffm_phage 10 MOI; agar plate assay
+0.3
+0.3
+0.3
+1.2
+0.3
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