Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

Or view all 554 experiments or choose conditions or try the comparative fitness browser

Group	Condition	PS417_12525	PS417_12530	PS417_12535	PS417_12540	PS417_12545
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.8	-0.9	-1.7	-0.0	-0.1
soil	soil sample 5; outgrowth in LB	-0.5	+1.1	-4.2	+0.1	+0.1
carbon source	2'-Deoxyinosine 5 mM (C)	-2.3	+0.1	+0.1	-0.5	-0.2
stress	methylglyoxal 0.032 vol%	-0.3	-0.2	-0.8	-1.2	+0.1
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.9	-0.1	-0.3	-1.3	+0.3
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	-0.7	-0.4	-1.1	+0.2	-0.1
phage	JP1 MOI 10	+0.2	-0.1	-0.3	-2.0	+0.0
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+0.1	-0.5	-0.8	-1.3	+0.6
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	-0.1	+0.5	-1.1	-1.1	-0.1
nophagecontrol	Only library	+0.5	-0.2	-1.5	-0.7	+0.2
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.7	-0.3	-1.5	+1.0	-0.1
carbon source	2'-Deoxyinosine 5 mM (C)	-1.1	+0.7	+0.0	-0.8	-0.3
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	-0.5	+0.3	-1.0	+0.5	-0.5
phage	P. simiae Grant Run MOI 0.1	+0.7	-0.3	-1.3	-0.2	+0.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.5	+0.4	-0.7	-0.7	-0.2
in planta	Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.4	+0.4	-0.7	-0.4	+0.6
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.4	-0.2	-1.2	+0.8	-0.0
in planta	Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.7	+0.2	+0.8	-0.9	+0.4
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-1.0	-0.4	-0.3	+1.3	+0.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.7	+0.0	+0.4	-1.2	+0.3
rhizosphere	rhizosphere sample 2; outgrowth in LB	-0.6	+1.8	+0.3	-0.3	-0.5
phage	Wcs_1	-0.7	-0.4	+0.5	+1.3	+0.2
phage	P. simiae OR Antrim MOI 1	+0.6	-0.3	+0.7	-0.5	+0.4
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.0	+0.8	+1.3	-0.2	+0.5
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+1.8	+0.6	-0.4	+0.4	+0.1
rhizosphere	rhizosphere sample 1; outgrowth in LB	-0.0	+1.5	+0.3	+0.9	-0.1
phage	P. simiae ORA MOI 0.1	+1.0	+0.4	+0.8	+0.1	+0.3
soil	soil sample 8; outgrowth in LB	+0.4	+1.0	+1.1	+0.3	-0.0
soil	soil sample 4; outgrowth in LB	+0.7	+1.0	+0.2	+0.8	+0.1
root	root sample 6; outgrowth in LB	-0.5	+1.7	+0.5	+0.4	+0.8