Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF2451 and GFF2452 are separated by 92 nucleotidesGFF2452 and GFF2453 are separated by 85 nucleotidesGFF2453 and GFF2454 are separated by 266 nucleotidesGFF2454 and GFF2455 overlap by 4 nucleotides GFF2451 - Cytosine/purine/uracil/thiamine/allantoin permease family protein, at 506,694 to 508,199 GFF2451 GFF2452 - NAD-dependent dihydropyrimidine dehydrogenase subunit PreA (EC 1.3.1.1), at 508,292 to 509,602 GFF2452 GFF2453 - NAD-dependent dihydropyrimidine dehydrogenase subunit PreT (EC 1.3.1.1), at 509,688 to 511,058 GFF2453 GFF2454 - Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1), at 511,325 to 512,776 GFF2454 GFF2455 - Transcriptional regulator RutR of pyrimidine catabolism (TetR family), at 512,773 to 513,465 GFF2455
Group Condition GFF2451 GFF2452 GFF2453 GFF2454 GFF2455
complex community Community=guar; Passage=4 -0.7 -0.5 -0.1 +0.3 -0.4
complex community Community=guar; Passage=4 -0.0 -0.3 -0.5 +0.2 -0.3
complex community Community=guar; Passage=4 -0.5 -0.0 -0.5 +0.3 -0.2
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.5 -0.1 -0.1 +0.1 -0.1
complex community Community=arabino-guar; Passage=4 -0.2 +0.1 +0.1 +0.0 -0.8
complex community Community=Locust bean gum; Passage=4 +0.2 -0.3 -0.6 +0.2 -0.3
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.1 +0.1 -0.1 -0.3 -0.3
complex community Community=guar; Passage=4 +0.4 -1.0 +0.2 +0.5 -0.4
complex community Community=Locust bean gum; Passage=4 -0.3 -0.4 +0.2 +0.1 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.1 -0.1 -0.2 -0.2 +0.3
complex community Community=arabino-guar; Passage=4 +0.4 -0.1 +0.3 +0.2 -0.8
complex community Community=Locust bean gum; Passage=4 +0.6 -0.7 -0.1 +0.5 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.0 -0.5 +0.0 +0.1 +0.4
phage phage_bap4 -0.3 -0.1 +0.2 +0.0 +0.4
vitamin M9 with Supernatant from Cyptococcus +0.3 -0.3 -0.2 +0.1 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.0 +0.1 -0.1 -0.3 +0.6
complex community Community=Kojac gum; Passage=4 -0.1 -0.1 +0.5 -0.1 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.3 +0.3 -0.0 -0.1 +0.5
vitamin M9 with calcium pantothenate 10 mg/mL +0.1 +0.1 -0.2 -0.1 +0.6
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.1 -0.1 -0.0 -0.0 +0.6
vitamin M9 with calcium pantothenate 10 mg/mL -0.4 -0.1 +0.2 -0.1 +0.8
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.1 +0.1 -0.1 +0.1 +0.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.2 -0.1 -0.1 +0.0 +0.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.2 +0.2 +0.0 -0.1 +0.4
vitamin M9 with calcium pantothenate 10 mg/mL +0.1 +0.0 -0.1 -0.1 +0.7
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.0 +0.2 +0.1 -0.2 +0.7
vitamin M9 with calcium pantothenate 10 mg/mL -0.2 +0.1 -0.2 +0.1 +0.9
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.4 +0.2 +0.0 -0.0 +0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.2 +0.1 +0.2 -0.1 +0.7
vitamin M9 with calcium pantothenate 10 mg/mL -0.0 +0.2 +0.1 +0.0 +0.8
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