Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

Or view all 554 experiments or choose conditions or try the comparative fitness browser

Group	Condition	PS417_12390	PS417_12395	PS417_12400	PS417_12405	PS417_12410
phage moi 100	Time6-phageFRS	-1.3	-0.1	-0.7	+0.1	N.D.
agar plate interaction control	Taped volatile agar plate with no fungus	-0.8	-0.3	-0.9	+0.3	N.D.
phage	JP1 MOI 10	-2.0	+0.4	-0.0	-0.1	N.D.
stress	methylglyoxal 0.032 vol%	-1.2	+0.3	-1.2	+0.5	N.D.
rhizosphere	rhizosphere sample 8; outgrowth in LB	-1.8	-0.0	+0.8	-0.6	N.D.
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.1	-0.3	-1.4	+0.3	N.D.
rhizosphere	rhizosphere sample 2; outgrowth in LB	+0.7	-0.8	-0.7	-0.6	N.D.
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Threonine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.3	-0.3	+0.1	+0.4	N.D.
phage	Wcs_0.1	-0.5	+0.2	-1.1	+0.4	N.D.
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.9	-0.5	+0.9	-0.2	N.D.
carbon source	2-Deoxy-D-Ribose 10 mM (C)	-1.1	-0.0	+0.7	-0.2	N.D.
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.4	+0.4	+1.0	-0.4	N.D.
phage	P. simiae ORA MOI 0.1	-1.0	-0.1	+1.0	-0.3	N.D.
in planta	Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+0.8	-0.3	-1.0	+0.6	N.D.
solid stress	Fraxetin 3 mM; solid stress	+1.0	+0.2	-0.7	-0.3	N.D.
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.5	-0.5	+0.7	-0.5	N.D.
soil	soil sample 6; outgrowth in LB	+1.2	-0.0	-0.4	-0.7	N.D.
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Aspartic Acid; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	+0.5	-0.1	+0.7	-0.9	N.D.
phage	P. simiae ORA MOI 10	+1.3	-0.3	-0.3	-0.4	N.D.
soil	soil sample 3; outgrowth in LB	+0.6	-0.2	+0.6	-0.7	N.D.
phage	JP1 MOI 10	-0.4	-0.5	+1.1	+0.5	N.D.
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.7	+0.5	+0.8	+0.7	N.D.
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days	-0.6	-0.2	+1.3	+0.8	N.D.
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	+0.3	+2.1	-0.7	-0.2	N.D.
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+1.5	-0.4	-0.3	+1.1	N.D.
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+1.1	-0.0	+0.8	+0.2	N.D.
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+1.3	-0.1	+0.6	+0.3	N.D.
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+1.5	+0.0	+0.6	+0.3	N.D.
soil	soil sample 7; outgrowth in LB	+1.5	+0.3	+1.0	-0.1	N.D.
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	+2.0	+0.4	+0.7	+0.4	N.D.