Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF2423 and GFF2424 overlap by 4 nucleotidesGFF2424 and GFF2425 overlap by 4 nucleotidesGFF2425 and GFF2426 are separated by 33 nucleotidesGFF2426 and GFF2427 are separated by 160 nucleotides GFF2423 - Spermidine Putrescine ABC transporter permease component potC (TC_3.A.1.11.1), at 474,255 to 475,046 GFF2423 GFF2424 - ABC transporter, permease protein 1 (cluster 1, maltose/g3p/polyamine/iron), at 475,043 to 475,894 GFF2424 GFF2425 - Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1), at 475,891 to 476,982 GFF2425 GFF2426 - ABC transporter, substrate-binding protein (cluster 1, maltose/g3p/polyamine/iron), at 477,016 to 478,050 GFF2426 GFF2427 - Transcriptional regulator, MarR family, at 478,211 to 478,834 GFF2427
Group Condition GFF2423 GFF2424 GFF2425 GFF2426 GFF2427
complex community Community=Locust bean gum; Passage=4 -0.8 -0.6 -0.6 -0.2 -0.9
complex community Community=guar; Passage=4 +0.3 -0.4 -0.2 +0.1 -1.5
complex community Community=arabino-guar; Passage=4 +0.0 -0.1 -0.5 -0.4 -0.5
complex community Community=Locust bean gum; Passage=4 +0.5 +0.3 -0.7 -0.8 -0.8
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.3 -0.0 -0.5 -0.1 -0.4
complex community Community=arabino-guar; Passage=4 +0.5 +0.0 -0.4 -1.0 -0.2
complex community Community=guar; Passage=4 -0.3 +0.3 -0.8 -0.8 +0.7
complex community Community=arabino-guar; Passage=4 +0.1 -0.4 +0.1 +0.1 -0.6
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.0 -0.0 +0.4 -0.3 -0.6
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.2 +0.0 +0.3 -0.5 -0.5
complex community Community=Locust bean gum; Passage=4 -0.1 -0.2 -0.5 -0.0 +0.5
vitamin M9 with Supernatant from Cyptococcus +0.0 -0.4 +0.3 -0.3 +0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.2 -0.0 +0.4 +0.1 -0.7
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.0 -0.0 +0.6 -0.4 -0.1
complex community Community=guar; Passage=4 -0.3 -0.0 +0.4 +0.4 -0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.1 +0.1 +0.7 -0.5 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.5 -0.1 +0.8 +0.0 -0.2
complex community Community=arabino-guar; Passage=4 +0.2 +0.2 +0.4 +0.4 -0.9
complex community Community=Locust bean gum; Passage=4 -0.2 -0.2 -0.2 +0.6 +0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.2 -0.4 +0.7 +0.3 +0.0
no phage control no phage control +0.4 -0.0 +0.4 +0.0 -0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.4 +0.1 +0.4 +0.1 +0.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.0 -0.1 +0.6 +0.3 -0.2
phage phage_bap4 +0.1 -0.1 +0.8 -0.2 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL -0.2 -0.0 +0.8 -0.0 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 +0.2 +0.7 +0.2 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.3 +0.0 +0.9 -0.3 +0.3
no phage control no phage control +0.6 +0.1 +0.2 +0.1 +0.3
phage phage_bap4 +0.6 +0.3 +0.4 +0.2 +0.1
complex community Community=Kojac gum; Passage=4 +0.2 -0.0 +1.3 +0.1 +0.3
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