Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF2420 and GFF2421 are separated by 13 nucleotidesGFF2421 and GFF2422 overlap by 4 nucleotidesGFF2422 and GFF2423 are separated by 36 nucleotidesGFF2423 and GFF2424 overlap by 4 nucleotides GFF2420 - Oxidoreductase, short-chain dehydrogenase/reductase family, at 471,867 to 472,622 GFF2420 GFF2421 - Oxidoreductase, short-chain dehydrogenase/reductase family, at 472,636 to 473,397 GFF2421 GFF2422 - Polysaccharide deacetylase, at 473,394 to 474,218 GFF2422 GFF2423 - Spermidine Putrescine ABC transporter permease component potC (TC_3.A.1.11.1), at 474,255 to 475,046 GFF2423 GFF2424 - ABC transporter, permease protein 1 (cluster 1, maltose/g3p/polyamine/iron), at 475,043 to 475,894 GFF2424
Group Condition GFF2420 GFF2421 GFF2422 GFF2423 GFF2424
complex community Community=guar; Passage=4 N.D. N.D. -2.9 -0.0 -0.2
complex community Community=arabino-guar; Passage=4 N.D. N.D. -2.7 +0.0 -0.1
complex community Community=Kojac gum; Passage=4 N.D. N.D. -2.7 +0.2 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. N.D. -1.2 -0.2 -0.1
complex community Community=Locust bean gum; Passage=4 N.D. N.D. -0.9 -0.1 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. N.D. -0.3 -0.5 -0.1
complex community Community=Locust bean gum; Passage=4 N.D. N.D. +0.5 -0.8 -0.6
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. N.D. -0.4 -0.4 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL N.D. N.D. -0.1 -0.5 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL N.D. N.D. -0.3 -0.2 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. N.D. +0.1 -0.2 -0.4
complex community Community=arabino-guar; Passage=4 N.D. N.D. -0.2 +0.1 -0.4
complex community Community=guar; Passage=4 N.D. N.D. -0.4 -0.3 +0.3
complex community Community=guar; Passage=4 N.D. N.D. -0.3 +0.3 -0.4
complex community Community=arabino-guar; Passage=4 N.D. N.D. -0.3 +0.2 +0.2
phage phage_bap4 N.D. N.D. -0.3 +0.3 +0.1
no phage control no phage control N.D. N.D. -0.3 +0.4 -0.0
complex community Community=guar; Passage=4 N.D. N.D. +0.5 -0.3 -0.0
complex community Community=arabino-guar; Passage=4 N.D. N.D. -0.3 +0.5 +0.0
no phage control no phage control N.D. N.D. -0.2 +0.6 +0.1
phage phage_bap4 N.D. N.D. +0.6 +0.2 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. N.D. +0.5 -0.1 +0.1
phage phage_bap4 N.D. N.D. +0.1 +0.3 +0.2
no phage control no phage control N.D. N.D. +0.0 +0.6 +0.1
phage phage_bap4 N.D. N.D. +0.6 +0.1 -0.1
phage phage_bap4 N.D. N.D. +0.1 +0.6 -0.0
vitamin M9 with Supernatant from Cyptococcus N.D. N.D. +0.8 -0.1 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. N.D. +0.7 +0.5 +0.0
complex community Community=Locust bean gum; Passage=4 N.D. N.D. +0.4 +0.5 +0.3
phage phage_bap4 N.D. N.D. +0.5 +0.6 +0.3
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