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Cofit
Protein
Homologs
Fitness for 5 genes in
Variovorax sp. SCN45
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF2413 and GFF2414 are separated by 38 nucleotides
GFF2414 and GFF2415 are separated by 12 nucleotides
GFF2415 and GFF2416 are separated by 92 nucleotides
GFF2416 and GFF2417 are separated by 0 nucleotides
GFF2413 - hypothetical protein, at 464,656 to 465,636
GFF2413
GFF2414 - Cell division protein FtsW, at 465,675 to 466,202
GFF2414
GFF2415 - Trans-aconitate 2-methyltransferase (EC 2.1.1.144), at 466,215 to 466,979
GFF2415
GFF2416 - Transcriptional regulator YbhD, LysR family, at 467,072 to 467,983
GFF2416
GFF2417 - putative amidase, at 467,984 to 469,414
GFF2417
Group
Condition
GFF2413
GFF2414
GFF2415
GFF2416
GFF2417
complex community
Community=arabino-guar; Passage=4
-0.5
-1.9
+0.2
-0.0
-0.3
complex community
Community=Locust bean gum; Passage=4
-0.6
+0.2
-0.5
-1.4
+0.2
complex community
Community=arabino-guar; Passage=4
-0.4
+0.1
+0.1
-1.5
+0.3
complex community
Community=guar; Passage=4
+0.5
-0.5
-1.1
+0.6
-0.6
vitamin
M9 with calcium pantothenate 10 mg/mL
-0.7
-0.0
-0.0
+0.3
-0.2
complex community
Community=arabino-guar; Passage=4
+0.1
-0.4
-0.4
-0.1
+0.1
phage
phage_bap4
-0.5
-0.4
+0.1
+0.3
-0.1
complex community
Community=Locust bean gum; Passage=4
-0.7
-0.7
+0.3
+0.8
-0.0
complex community
Community=guar; Passage=4
-0.2
-0.4
-0.2
+0.2
+0.4
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
+0.4
-0.6
+0.1
+0.1
-0.1
complex community
Community=Kojac gum; Passage=4
-1.5
+0.9
+0.5
+0.2
-0.2
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
-0.3
+0.7
-0.1
-0.2
-0.1
complex community
Community=arabino-guar; Passage=4
-0.2
-0.3
+0.1
+0.6
+0.1
vitamin
M9 with calcium pantothenate 10 mg/mL
-0.4
+0.5
-0.1
+0.1
+0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-0.1
+0.1
+0.3
+0.4
-0.3
vitamin
M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL
+0.3
+0.4
+0.3
-0.4
-0.0
vitamin
M9 with Supernatant from Cyptococcus
-0.4
+0.9
+0.1
+0.2
-0.2
complex community
Community=Locust bean gum; Passage=4
+1.1
-0.8
+0.2
+0.3
-0.1
vitamin
M9 with calcium pantothenate 10 mg/mL
+0.1
+0.5
+0.0
+0.3
-0.2
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
+0.6
+0.6
+0.1
-0.2
-0.2
vitamin
M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL
+0.2
+0.9
+0.1
-0.3
+0.0
complex community
Community=guar; Passage=4
+0.3
+0.5
-0.2
+0.3
-0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
+0.1
+0.7
+0.1
-0.1
+0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
+0.3
+1.0
+0.1
-0.4
+0.1
vitamin
M9 with Supernatant from Cyptococcus
+0.3
+0.8
-0.1
+0.1
+0.0
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
+0.2
+0.8
-0.0
+0.2
-0.0
complex community
Community=Locust bean gum; Passage=4
+0.7
+0.5
-0.6
+1.1
-0.5
vitamin
M9 with calcium pantothenate 10 mg/mL
+0.4
+1.0
+0.1
-0.3
+0.0
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
+0.3
+0.7
+0.0
+0.0
+0.2
phage
phage_bap4
+0.6
+0.7
+0.1
+0.1
+0.4
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