Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF2405 and GFF2406 are separated by 21 nucleotidesGFF2406 and GFF2407 are separated by 8 nucleotidesGFF2407 and GFF2408 are separated by 12 nucleotidesGFF2408 and GFF2409 are separated by 23 nucleotides GFF2405 - Peptide-methionine (R)-S-oxide reductase MsrB (EC 1.8.4.12), at 457,775 to 458,284 GFF2405 GFF2406 - DipZ protein, at 458,306 to 460,159 GFF2406 GFF2407 - hypothetical protein, at 460,168 to 460,629 GFF2407 GFF2408 - FIG00976241: hypothetical protein, at 460,642 to 461,388 GFF2408 GFF2409 - Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1), at 461,412 to 462,752 GFF2409
Group Condition GFF2405 GFF2406 GFF2407 GFF2408 GFF2409
complex community Community=arabino-guar; Passage=4 -2.7 -0.4 -0.1 +0.9 -0.3
complex community Community=arabino-guar; Passage=4 -0.8 +0.4 +0.1 -1.5 -0.1
complex community Community=Locust bean gum; Passage=4 -1.0 +0.3 -0.0 -1.3 +0.1
complex community Community=guar; Passage=4 -0.6 +0.3 -0.1 -0.8 -0.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.7 -0.0 +0.2 -0.3 -0.3
vitamin M9 with Supernatant from Cyptococcus -1.0 +0.1 -0.0 -0.3 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.6 +0.0 +0.1 -0.5 -0.0
phage phage_bap4 -0.5 -0.1 -0.1 -0.1 +0.0
complex community Community=guar; Passage=4 -0.5 -0.0 -0.6 +0.1 +0.1
vitamin M9 with Supernatant from Cyptococcus +0.5 +0.2 -0.2 -1.2 -0.0
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.5 -0.2 -0.1 +0.2 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.5 +0.1 +0.2 -0.3 -0.1
phage phage_bap4 -0.5 -0.1 -0.1 +0.1 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL -0.3 +0.1 -0.2 +0.1 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.7 +0.1 +0.1 +0.1 -0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.1 +0.1 -0.2 +0.2 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL -0.2 -0.0 -0.2 +0.4 -0.1
complex community Community=Locust bean gum; Passage=4 +1.1 -0.0 -0.1 -1.3 +0.0
complex community Community=Locust bean gum; Passage=4 -0.2 +0.2 -0.4 -0.1 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.5 -0.2 -0.1 +0.2 -0.3
complex community Community=Kojac gum; Passage=4 -0.2 +0.8 +0.1 -0.9 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.4 +0.1 +0.1 +0.5 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL -0.1 +0.1 -0.1 +0.5 -0.2
vitamin M9 with Supernatant from Cyptococcus -0.4 +0.2 +0.1 +0.3 -0.0
complex community Community=guar; Passage=4 -0.2 +0.0 +0.5 +0.2 -0.0
vitamin M9 with Supernatant from Cyptococcus -0.7 +0.0 +0.1 +0.9 +0.2
phage phage_bap4 +0.6 +0.1 +0.2 -0.2 +0.1
phage phage_bap4 +0.3 +0.1 +0.1 +0.5 -0.0
complex community Community=arabino-guar; Passage=4 +1.3 +0.3 +0.5 -0.9 -0.1
complex community Community=arabino-guar; Passage=4 +1.7 +0.5 -0.2 +0.3 +0.1
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