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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF2403 and GFF2404 are separated by 79 nucleotides
GFF2404 and GFF2405 are separated by 90 nucleotides
GFF2405 and GFF2406 are separated by 118 nucleotides
GFF2406 and GFF2407 overlap by 43 nucleotides
GFF2403 - hypothetical protein, at 2,422,922 to 2,423,257
GFF2403
GFF2404 - Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3), at 2,423,337 to 2,425,514
GFF2404
GFF2405 - hypothetical protein, at 2,425,605 to 2,426,072
GFF2405
GFF2406 - Xylan 1,4-beta-xylosidase (EC 3.2.1.37), at 2,426,191 to 2,427,861
GFF2406
GFF2407 - Malonyl-[acyl-carrier protein] O-methyltransferase (EC 2.1.1.197), at 2,427,819 to 2,428,604
GFF2407
Group
Condition
GFF2403
GFF2404
GFF2405
GFF2406
GFF2407
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.4
-3.4
-0.5
-0.0
-0.4
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.1
-4.4
-0.1
-0.1
+0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.2
-4.4
-0.0
-0.0
+0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.2
-4.2
-0.1
-0.2
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.1
-3.0
-0.3
+0.1
-0.8
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.1
-4.0
-0.1
-0.1
+0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.3
-3.3
-0.4
+0.1
-0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.1
-3.5
-0.1
-0.1
-0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.2
-4.1
-0.0
+0.1
+0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
-3.9
-0.1
-0.1
+0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
-3.7
+0.1
-0.0
+0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.0
-3.3
-0.2
-0.0
+0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.3
-3.3
-0.1
-0.0
-0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.1
-3.1
-0.1
+0.1
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.0
-3.1
-0.1
-0.0
+0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.0
-2.8
+0.1
-0.0
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.1
-2.7
-0.1
+0.0
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.0
-2.3
+0.0
-0.0
+0.0
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