Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF2402 and GFF2403 are separated by 54 nucleotidesGFF2403 and GFF2404 are separated by 121 nucleotidesGFF2404 and GFF2405 are separated by 152 nucleotidesGFF2405 and GFF2406 are separated by 21 nucleotides GFF2402 - hypothetical protein, at 455,291 to 455,752 GFF2402 GFF2403 - CHAP domain containing protein, at 455,807 to 456,418 GFF2403 GFF2404 - Hypothetical protein with Rieske (2Fe-2S) region, at 456,540 to 457,622 GFF2404 GFF2405 - Peptide-methionine (R)-S-oxide reductase MsrB (EC 1.8.4.12), at 457,775 to 458,284 GFF2405 GFF2406 - DipZ protein, at 458,306 to 460,159 GFF2406
Group Condition GFF2402 GFF2403 GFF2404 GFF2405 GFF2406
complex community Community=arabino-guar; Passage=4 -0.0 -0.2 +0.5 -2.7 -0.4
complex community Community=Locust bean gum; Passage=4 -0.1 -0.9 -0.1 -1.0 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.1 -0.2 -0.2 -0.6 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.1 -0.2 -0.0 -0.7 +0.1
complex community Community=guar; Passage=4 -0.0 -0.5 +0.1 -0.5 -0.0
phage phage_bap4 -0.0 -0.1 -0.1 -0.5 -0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.1 -0.2 -0.0 -0.5 -0.2
vitamin M9 with Supernatant from Cyptococcus +0.2 -0.0 -0.1 -1.0 +0.1
complex community Community=guar; Passage=4 +0.2 -0.3 -0.3 -0.6 +0.3
complex community Community=arabino-guar; Passage=4 +0.1 -0.5 +0.3 -0.8 +0.4
phage phage_bap4 -0.1 +0.0 +0.1 -0.5 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL -0.1 +0.1 -0.1 -0.6 +0.1
no phage control no phage control +0.1 -0.1 -0.1 -0.4 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL +0.1 -0.1 +0.0 -0.6 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.1 +0.1 +0.0 -0.7 -0.0
vitamin M9 with Supernatant from Cyptococcus +0.1 -0.1 -0.1 -0.4 +0.2
vitamin M9 with Supernatant from Cyptococcus +0.1 +0.1 +0.2 -0.7 +0.0
complex community Community=Locust bean gum; Passage=4 -0.3 +0.2 +0.1 -0.2 +0.2
complex community Community=guar; Passage=4 -0.0 -0.3 -0.1 +0.1 +0.3
complex community Community=Locust bean gum; Passage=4 -0.2 -0.2 +0.4 +0.1 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.2 +0.2 -0.2 +0.3 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.1 -0.1 -0.1 +0.5 -0.2
complex community Community=Kojac gum; Passage=4 -0.0 -0.1 -0.3 -0.2 +0.8
phage phage_bap4 +0.2 -0.1 -0.0 +0.3 +0.0
phage phage_bap4 +0.1 +0.0 -0.1 +0.6 +0.1
phage phage_bap4 +0.2 +0.1 +0.3 -0.0 +0.2
vitamin M9 with Supernatant from Cyptococcus -0.1 +0.2 +0.1 +0.5 +0.2
complex community Community=Locust bean gum; Passage=4 +0.4 -0.7 +0.5 +1.1 -0.0
complex community Community=arabino-guar; Passage=4 -0.2 +0.7 -0.0 +1.3 +0.3
complex community Community=arabino-guar; Passage=4 +0.0 +0.5 -0.2 +1.7 +0.5
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