Fitness for 5 genes in Variovorax sp. SCN45

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 61 experiments or choose conditions or try the comparative fitness browser

500 ntGFF2399 and GFF2400 are separated by 73 nucleotidesGFF2400 and GFF2401 overlap by 4 nucleotidesGFF2401 and GFF2402 are separated by 129 nucleotidesGFF2402 and GFF2403 are separated by 54 nucleotides GFF2399 - TonB-dependent receptor, at 450,935 to 453,469 GFF2399 GFF2400 - no description, at 453,543 to 454,592 GFF2400 GFF2401 - hypothetical protein, at 454,589 to 455,161 GFF2401 GFF2402 - hypothetical protein, at 455,291 to 455,752 GFF2402 GFF2403 - CHAP domain containing protein, at 455,807 to 456,418 GFF2403
Group Condition GFF2399 GFF2400 GFF2401 GFF2402 GFF2403
complex community Community=Locust bean gum; Passage=4 -0.8 -1.2 -0.8 -0.1 -0.9
complex community Community=arabino-guar; Passage=4 -0.1 -3.1 -0.6 -0.2 +0.7
complex community Community=guar; Passage=4 -0.1 -2.0 -0.3 +0.2 -0.3
complex community Community=guar; Passage=4 -0.0 -0.7 -0.1 -0.0 -0.5
complex community Community=guar; Passage=4 -0.1 -0.9 +0.2 -0.0 -0.3
complex community Community=Kojac gum; Passage=4 -0.1 -0.8 +0.0 -0.0 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL -0.3 -0.2 -0.3 -0.1 -0.1
complex community Community=guar; Passage=4 -0.1 -0.9 +0.1 +0.1 -0.0
complex community Community=Locust bean gum; Passage=4 +0.1 -0.4 -0.5 -0.3 +0.2
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.3 -0.6 +0.3 +0.1 -0.3
complex community Community=arabino-guar; Passage=4 +0.2 -0.2 -0.5 -0.0 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.3 -0.4 +0.1 +0.0 -0.1
vitamin M9 with Supernatant from Cyptococcus -0.0 -0.1 -0.4 +0.1 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL -0.3 -0.2 +0.1 +0.1 -0.1
vitamin M9 with Supernatant from Cyptococcus -0.1 -0.7 +0.1 +0.2 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.2 +0.2 -0.4 +0.0 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.2 -0.4 +0.1 +0.1 +0.1
complex community Community=arabino-guar; Passage=4 +0.2 -0.2 -0.0 +0.1 -0.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.0 -0.3 +0.2 -0.1 -0.2
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.2 -0.6 -0.1 -0.0 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.3 +0.2 +0.0 -0.1 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL -0.2 +0.2 -0.3 +0.1 -0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.2 -0.3 +0.2 +0.2 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.2 -0.3 -0.2 -0.0 +0.2
phage phage_bap4 -0.3 +0.2 -0.2 +0.2 -0.1
vitamin M9 with Supernatant from Cyptococcus +0.1 -0.4 +0.2 -0.1 +0.2
complex community Community=Locust bean gum; Passage=4 -0.1 +0.3 +0.4 +0.4 -0.7
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.0 +0.1 +0.4 -0.2 +0.2
complex community Community=arabino-guar; Passage=4 +0.3 -0.2 +0.3 +0.0 +0.5
phage phage_bap4 -0.0 +0.2 +0.3 +0.2 +0.1
remove
GFF2399
plot
remove
GFF2400
plot
remove
GFF2401
remove
GFF2402
plot
remove
GFF2403
plot