Fitness for 5 genes in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

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500 ntGFF2384 and GFF2385 are separated by 40 nucleotidesGFF2385 and GFF2386 are separated by 107 nucleotidesGFF2386 and GFF2387 are separated by 10 nucleotidesGFF2387 and GFF2388 are separated by 262 nucleotides GFF2384 - DNA-directed RNA polymerase alpha subunit (EC 2.7.7.6), at 14,074 to 15,063 GFF2384 GFF2385 - LSU ribosomal protein L17p, at 15,104 to 15,487 GFF2385 GFF2386 - FIG004614: Putative cytoplasmic protein, at 15,595 to 15,963 GFF2386 GFF2387 - transcriptional regulator, MerR family, at 15,974 to 16,399 GFF2387 GFF2388 - Large-conductance mechanosensitive channel, at 16,662 to 17,075 GFF2388
Group Condition GFF2384 GFF2385 GFF2386 GFF2387 GFF2388
phage LB_plus_SM_buffer with 8C2_phage 15 MOI N.D. N.D. -0.9 -0.3 -0.1
phage LB_plus_SM_buffer with EIP16_phage 8.75 MOI N.D. N.D. -0.5 -0.8 +0.1
micoeukaryotes Dictyostellum sp.mixed culture-1 N.D. N.D. +0.1 -0.7 -0.4
micoeukaryotes Acanthamoeba sp., muxed culture-1 N.D. N.D. -0.0 -0.8 +0.2
phage LB_plus_SM_buffer with EIP30_phage 0.0000875 MOI N.D. N.D. -0.2 -0.6 +0.2
phage Ffm_phage 10 MOI; agar plate assay N.D. N.D. -0.9 +0.0 +0.4
phage LB_plus_SM_buffer with P22_phage 15 MOI N.D. N.D. +0.3 -0.6 +0.0
phage LB_plus_SM_buffer with 6F2_phage 1.875 MOI N.D. N.D. -0.2 -0.4 +0.3
micoeukaryotes Dictyostellum sp.mixed culture-2 N.D. N.D. -0.1 -0.8 +0.6
nophagecontrol No phage control N.D. N.D. +0.1 -0.7 +0.3
phage Br60_phage 15 MOI N.D. N.D. +0.3 -0.9 +0.4
phage 6H2_phage 10 MOI; agar plate assay N.D. N.D. -0.7 +0.2 +0.3
phage LB_plus_SM_buffer with Ffm_phage 1.875 MOI N.D. N.D. -0.5 +0.1 +0.3
phage LB_plus_SM_buffer with FelixO1_phage (wt new) 0.075 MOI N.D. N.D. -0.5 +0.2 +0.3
lb_plus_sm_buffer LB_plus_SM_buffer N.D. N.D. -0.5 +0.3 +0.2
phage phi19h1_phage 15 MOI N.D. N.D. +0.6 -0.4 -0.0
phage phi19h1_phage 15 MOI N.D. N.D. -0.4 +0.3 +0.2
phage LB_plus_SM_buffer with ES18h1_phage 0.75 MOI N.D. N.D. -1.1 +0.6 +0.8
phage LB_plus_SM_buffer with Br60_phage 0.0005 MOI N.D. N.D. +0.6 -0.0 -0.4
micoeukaryotes C.elegans, mixed culture-2 N.D. N.D. +0.4 -0.4 +0.2
phage LB_plus_SM_buffer with Br60_phage 0.0000005 MOI N.D. N.D. -0.3 +0.1 +0.6
phage LB_plus_SM_buffer with S16_phage 15 MOI N.D. N.D. -0.1 +0.7 +0.1
phage LB_plus_SM_buffer with S16_phage 15 MOI N.D. N.D. +0.0 +0.9 -0.2
lb_plus_sm_buffer LB_plus_SM_buffer N.D. N.D. -0.1 +0.4 +0.5
phage LB_plus_SM_buffer with 8C2_phage 15 MOI N.D. N.D. +0.2 +0.4 +0.3
phage LB_plus_SM_buffer with FelixO1_phage (old) 15 MOI N.D. N.D. +0.3 +0.7 -0.1
phage LB_plus_SM_buffer with FelixO1_phage (LP_new) 15 MOI N.D. N.D. +0.4 +0.6 +0.0
phage LB_plus_SM_buffer with phi19h1_phage 0.1875 MOI N.D. N.D. +0.3 +0.2 +0.7
phage LB_plus_SM_buffer with 6F2_phage 0.1875 MOI N.D. N.D. -0.3 +1.7 +0.0
phage LB_plus_SM_buffer with FelixO1_phage 0.5 MOI N.D. N.D. +0.8 +0.9 +0.0
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