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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF2372 and GFF2373 are separated by 3 nucleotides
GFF2373 and GFF2374 are separated by 56 nucleotides
GFF2374 and GFF2375 are separated by 151 nucleotides
GFF2375 and GFF2376 are separated by 28 nucleotides
GFF2372 - RNA binding S1 domain protein, at 2,395,438 to 2,396,166
GFF2372
GFF2373 - hypothetical protein, at 2,396,170 to 2,396,940
GFF2373
GFF2374 - P-hydroxybenzoate hydroxylase (EC 1.14.13.2), at 2,396,997 to 2,398,178
GFF2374
GFF2375 - hypothetical protein, at 2,398,330 to 2,399,211
GFF2375
GFF2376 - Short-chain dehydrogenase, at 2,399,240 to 2,399,833
GFF2376
Group
Condition
GFF2372
GFF2373
GFF2374
GFF2375
GFF2376
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.1
+0.0
-0.0
+0.0
-0.5
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.1
-0.1
-0.0
+0.0
-0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.1
+0.1
-0.0
-0.2
-0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.0
-0.1
+0.1
+0.1
-0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.3
-0.3
+0.0
-0.0
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.1
+0.0
-0.1
-0.0
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.0
-0.2
-0.2
-0.2
+0.4
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.1
-0.0
-0.1
+0.2
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.1
-0.1
+0.1
+0.1
-0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.1
+0.2
+0.1
+0.0
-0.3
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
-0.1
-0.1
+0.1
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.2
+0.0
+0.0
+0.0
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.1
+0.1
+0.0
+0.1
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.1
+0.1
+0.1
+0.0
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.2
+0.0
-0.1
-0.0
-0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
-0.1
+0.1
+0.2
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.0
+0.2
-0.0
+0.1
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.3
+0.1
+0.2
+0.2
-0.3
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