Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF2362 and GFF2363 are separated by 17 nucleotidesGFF2363 and GFF2364 are separated by 10 nucleotidesGFF2364 and GFF2365 are separated by 42 nucleotidesGFF2365 and GFF2366 are separated by 24 nucleotides GFF2362 - PQQ-dependent oxidoreductase, gdhB family, at 415,166 to 416,365 GFF2362 GFF2363 - 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase (EC 4.1.2.52), at 416,383 to 417,198 GFF2363 GFF2364 - Succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16), at 417,209 to 418,678 GFF2364 GFF2365 - Altronate dehydratase (EC 4.2.1.7), at 418,721 to 420,244 GFF2365 GFF2366 - Tricarboxylate transport protein TctC, at 420,269 to 421,267 GFF2366
Group Condition GFF2362 GFF2363 GFF2364 GFF2365 GFF2366
complex community Community=Locust bean gum; Passage=4 -0.4 -0.5 -0.1 -3.9 -0.5
complex community Community=guar; Passage=4 -0.3 -1.2 +0.4 -2.0 -0.1
complex community Community=Locust bean gum; Passage=4 -0.2 +0.3 -0.2 -2.6 +0.0
complex community Community=guar; Passage=4 +0.0 -0.2 +0.1 -1.5 -0.6
complex community Community=Locust bean gum; Passage=4 -0.0 -0.3 +0.6 -1.9 -0.1
complex community Community=Locust bean gum; Passage=4 +0.1 +0.2 +0.4 -2.0 -0.0
complex community Community=guar; Passage=4 -0.1 +0.4 +0.0 -1.7 +0.3
complex community Community=guar; Passage=4 -0.1 +0.6 +0.1 -0.9 -0.7
complex community Community=arabino-guar; Passage=4 +0.3 -0.1 +0.2 -0.4 -0.7
complex community Community=arabino-guar; Passage=4 +0.1 +0.7 -0.1 -0.5 -0.7
vitamin M9 with calcium pantothenate 10 mg/mL +0.1 -0.4 -0.3 +0.2 -0.0
phage phage_bap4 +0.0 +0.3 -0.5 -0.0 -0.1
complex community Community=arabino-guar; Passage=4 +0.2 +0.5 -0.1 -1.0 +0.0
no phage control no phage control -0.1 +0.2 -0.5 +0.1 -0.0
phage phage_bap4 +0.1 +0.3 -0.2 -0.2 -0.3
complex community Community=arabino-guar; Passage=4 -0.1 +0.6 -0.3 -0.3 +0.0
phage phage_bap4 +0.2 -0.3 -0.1 +0.3 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.2 -0.3 -0.0 +0.2 +0.2
phage phage_bap4 -0.1 +0.2 +0.1 +0.2 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL +0.1 -0.2 -0.1 +0.2 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.1 +0.0 -0.2 +0.5 +0.1
vitamin M9 with Supernatant from Cyptococcus +0.0 +0.1 +0.1 +0.4 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.0 +0.1 +0.5 +0.1 -0.1
phage phage_bap4 -0.1 +0.2 +0.2 +0.2 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.2 +0.1 +0.5 +0.0 -0.1
vitamin M9 with Supernatant from Cyptococcus +0.2 +0.2 +0.3 +0.1 -0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.1 +0.2 +0.2 +0.1 +0.3
vitamin M9 with Supernatant from Cyptococcus +0.2 +0.2 +0.2 +0.2 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.1 +0.3 +0.4 +0.2 +0.2
phage phage_bap4 +0.1 +0.5 +0.4 +0.2 +0.2
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