Fitness for 5 genes in Pseudomonas simiae WCS417

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500 ntPS417_01185 and PS417_01190 are separated by 13 nucleotidesPS417_01190 and PS417_01195 are separated by 115 nucleotidesPS417_01195 and PS417_01200 are separated by 39 nucleotidesPS417_01200 and PS417_01205 are separated by 104 nucleotides PS417_01185: PS417_01185 - ribosomal protein S6 modification protein, at 261,608 to 262,090 _01185 PS417_01190: PS417_01190 - diguanylate phosphodiesterase, at 262,104 to 262,883 _01190 PS417_01195: PS417_01195 - RNA-binding protein S4, at 262,999 to 263,406 _01195 PS417_01200: PS417_01200 - phosphoesterase, at 263,446 to 264,246 _01200 PS417_01205: PS417_01205 - molecular chaperone Hsp33, at 264,351 to 265,253 _01205
Group Condition PS417_01185 PS417_01190 PS417_01195 PS417_01200 PS417_01205
liquid stress Fraxetin 3 mM; liquid stress -1.6 -0.5 -0.5 -0.5 N.D.
carbon source L-Valine (C) -2.3 -0.4 -0.3 +0.0 N.D.
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.1 -0.4 -1.8 -0.8 N.D.
liquid stress Fraxetin 3 mM; liquid stress -1.7 -0.4 -0.1 -0.6 N.D.
liquid stress Scopoletin 3 mM; liquid stress -1.4 -0.6 -0.2 -0.7 N.D.
liquid stress 80% Methanol 3 mM; liquid stress -1.8 -0.5 -0.3 -0.2 N.D.
liquid stress 80% Methanol 3 mM; liquid stress -2.2 -0.6 +0.2 -0.1 N.D.
solid stress Fraxetin 3 mM; solid stress -0.9 -0.9 -1.0 +0.1 N.D.
liquid stress Fraxetin 3 mM; liquid stress -1.5 -0.3 -0.3 -0.5 N.D.
liquid stress Scopoletin 3 mM; liquid stress -1.3 -0.3 -0.3 -0.5 N.D.
liquid stress Scopoletin 3 mM; liquid stress -0.9 -0.3 -1.0 -0.2 N.D.
liquid stress Fraxetin 3 mM; liquid stress -1.6 -0.5 +0.1 -0.4 N.D.
liquid stress Fraxetin 3 mM; liquid stress -1.8 -0.6 +0.7 -0.6 N.D.
liquid stress 80% Methanol 3 mM; liquid stress -1.6 -0.5 +0.1 +0.2 N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3 -0.2 -1.7 +0.3 N.D.
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 +0.8 +0.1 -1.8 -0.2 N.D.
stress Doxycycline hyclate 0.001 mg/ml -0.9 -0.4 +0.5 +1.2 N.D.
stress R2A with Polymyxin B sulfate 0.002 mg/ml +0.7 +0.1 -0.8 +1.5 N.D.
stress R2A with Polymyxin B sulfate 0.002 mg/ml +0.3 +0.4 -0.8 +1.8 N.D.
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.1 +0.5 -0.2 +1.6 N.D.
stress R2A with Polymyxin B sulfate 0.002 mg/ml +0.3 +0.3 -0.1 +1.7 N.D.
stress Neomycin 0.04 mg/ml +0.5 -0.0 +0.7 +1.3 N.D.
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.1 +0.4 +0.8 +1.2 N.D.
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.5 +0.8 -0.4 +1.7 N.D.
stress R2A with Polymyxin B sulfate 0.002 mg/ml +0.5 +0.5 +0.1 +1.7 N.D.
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.8 +0.6 -0.4 +2.0 N.D.
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.8 +0.5 +0.2 +1.7 N.D.
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.5 +0.8 +0.7 +1.6 N.D.
stress R2A with Polymyxin B sulfate 0.002 mg/ml +0.7 +0.4 +0.7 +1.8 N.D.
stress R2A with Polymyxin B sulfate 0.003 mg/ml +1.3 +0.4 -0.0 +2.1 N.D.
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