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Cofit
Protein
Homologs
Fitness for 5 genes in
Variovorax sp. SCN45
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF2354 and GFF2355 are separated by 28 nucleotides
GFF2355 and GFF2356 are separated by 6 nucleotides
GFF2356 and GFF2357 overlap by 4 nucleotides
GFF2357 and GFF2358 are separated by 1 nucleotides
GFF2354 - FIG00555615: hypothetical protein, at 404,426 to 406,387
GFF2354
GFF2355 - A/G-specific adenine glycosylase (EC 3.2.2.-), at 406,416 to 407,462
GFF2355
GFF2356 - RNase adapter protein RapZ, at 407,469 to 408,347
GFF2356
GFF2357 - DNA repair protein RecN, at 408,344 to 410,026
GFF2357
GFF2358 - NAD kinase (EC 2.7.1.23), at 410,028 to 410,939
GFF2358
Group
Condition
GFF2354
GFF2355
GFF2356
GFF2357
GFF2358
phage
phage_bap4
-1.9
-0.0
-0.5
-0.2
N.D.
phage
phage_bap4
-1.7
+0.1
-0.5
-0.4
N.D.
complex community
Community=arabino-guar; Passage=4
-0.9
-0.2
-0.0
-1.5
N.D.
phage
phage_bap4
-1.5
-0.2
-0.4
-0.2
N.D.
phage
phage_bap4
-1.3
-0.1
-0.6
-0.2
N.D.
complex community
Community=Locust bean gum; Passage=4
-0.2
-0.3
-0.1
-1.1
N.D.
complex community
Community=arabino-guar; Passage=4
-0.6
+0.1
-0.2
-0.9
N.D.
complex community
Community=guar; Passage=4
-0.4
-0.1
-0.5
-0.6
N.D.
complex community
Community=Locust bean gum; Passage=4
-0.2
-0.8
-0.2
-0.2
N.D.
complex community
Community=guar; Passage=4
+0.1
-1.0
-0.1
-0.5
N.D.
complex community
Community=Locust bean gum; Passage=4
-0.4
+0.1
-0.5
-0.5
N.D.
complex community
Community=Kojac gum; Passage=4
-0.8
-0.0
-0.5
+0.2
N.D.
phage
phage_bap4
-1.1
-0.0
+0.1
+0.0
N.D.
complex community
Community=guar; Passage=4
-0.3
-0.2
-0.2
-0.3
N.D.
complex community
Community=arabino-guar; Passage=4
-0.3
+0.1
-0.5
-0.4
N.D.
phage
phage_bap4
-1.1
-0.0
+0.2
+0.0
N.D.
phage
phage_bap4
-1.1
+0.2
+0.1
-0.1
N.D.
phage
phage_bap4
-1.1
-0.2
+0.2
+0.2
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
+0.1
-0.5
-0.4
+0.1
N.D.
complex community
Community=Locust bean gum; Passage=4
+0.2
-0.2
-0.2
-0.5
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
+0.2
-0.1
-0.7
+0.1
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
+0.2
-0.3
-0.4
+0.1
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
+0.3
-0.2
-0.5
+0.0
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL
+0.2
-0.1
-0.6
+0.1
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
+0.1
-0.0
-0.7
+0.3
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
+0.2
-0.1
-0.8
+0.4
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
+0.3
-0.1
-0.6
+0.2
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL
+0.4
+0.0
-0.6
+0.2
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
+0.3
+0.2
-0.5
+0.0
N.D.
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
+0.2
+0.1
-0.3
+0.4
N.D.
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