Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF2342 and GFF2343 are separated by 5 nucleotidesGFF2343 and GFF2344 overlap by 4 nucleotidesGFF2344 and GFF2345 are separated by 112 nucleotidesGFF2345 and GFF2346 overlap by 15 nucleotides GFF2342 - ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines), at 393,687 to 394,676 GFF2342 GFF2343 - ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines), at 394,682 to 395,557 GFF2343 GFF2344 - ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines), at 395,554 to 396,504 GFF2344 GFF2345 - Uncharacterized ferredoxin-like protein YfhL, at 396,617 to 396,886 GFF2345 GFF2346 - no description, at 396,872 to 397,381 GFF2346
Group Condition GFF2342 GFF2343 GFF2344 GFF2345 GFF2346
complex community Community=guar; Passage=4 -0.4 -0.5 -1.5 -2.4 +0.1
no phage control no phage control -0.4 -1.0 -2.8 -0.3 -0.1
complex community Community=arabino-guar; Passage=4 -1.5 -2.0 -0.6 -0.0 -0.0
phage phage_bap4 -0.9 -1.1 -1.2 -0.1 +0.0
phage phage_bap4 -0.9 -0.9 -1.2 -0.1 +0.1
no phage control no phage control -0.7 -1.4 -0.9 -0.0 -0.1
complex community Community=arabino-guar; Passage=4 -1.1 -0.1 -2.1 +0.1 +0.4
phage phage_bap4 -0.4 -1.1 -0.8 -0.3 -0.0
no phage control no phage control -0.5 -1.4 -0.6 -0.2 +0.1
no phage control no phage control -0.6 -1.0 -1.0 +0.0 +0.2
complex community Community=Kojac gum; Passage=4 +0.3 -0.7 -1.9 -0.2 +0.2
complex community Community=arabino-guar; Passage=4 -0.6 -1.4 -1.0 +0.5 +0.3
complex community Community=Locust bean gum; Passage=1 -0.8 -0.4 -0.6 +0.0 -0.1
complex community Community=Locust bean gum; Passage=4 -0.2 +0.1 -2.4 +0.8 -0.1
phage phage_bap4 -0.4 -0.7 -0.6 -0.1 -0.1
vitamin M9 with Supernatant from Cyptococcus +0.4 -0.9 -1.2 -0.2 -0.0
complex community Community=guar; Passage=4 -0.4 -0.5 -0.6 -0.3 -0.0
complex community Community=guar; Passage=4 -1.4 -0.6 +0.2 +0.0 +0.2
complex community Community=Kojac gum; Passage=1 +0.0 -0.9 -0.8 +0.1 +0.0
phage phage_bap4 -0.5 -0.8 -0.6 +0.6 +0.0
vitamin M9 with Supernatant from Cyptococcus +0.1 -0.6 -0.7 -0.1 +0.2
vitamin M9 with Supernatant from Cyptococcus -0.4 -0.7 -0.4 +0.2 +0.1
vitamin M9 with Supernatant from Cyptococcus +0.4 -0.6 -0.7 -0.4 +0.2
complex community Community=Locust bean gum; Passage=4 -0.8 -0.7 +0.2 +0.4 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.4 +0.1 -0.6 -0.6 -0.1
complex community Community=Locust bean gum; Passage=4 -0.4 -0.4 -0.6 +0.8 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.4 +0.1 -0.5 -0.5 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL +0.7 -0.1 -0.5 -0.3 -0.1
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.1 -1.0 -0.3 +0.8 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.8 +0.3 +0.1 -0.2 +0.2
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