Fitness for 5 genes in Variovorax sp. SCN45

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 61 experiments or choose conditions or try the comparative fitness browser

500 ntGFF2341 and GFF2342 overlap by 4 nucleotidesGFF2342 and GFF2343 are separated by 5 nucleotidesGFF2343 and GFF2344 overlap by 4 nucleotidesGFF2344 and GFF2345 are separated by 112 nucleotides GFF2341 - ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines), at 392,860 to 393,690 GFF2341 GFF2342 - ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines), at 393,687 to 394,676 GFF2342 GFF2343 - ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines), at 394,682 to 395,557 GFF2343 GFF2344 - ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines), at 395,554 to 396,504 GFF2344 GFF2345 - Uncharacterized ferredoxin-like protein YfhL, at 396,617 to 396,886 GFF2345
Group Condition GFF2341 GFF2342 GFF2343 GFF2344 GFF2345
complex community Community=guar; Passage=4 -4.4 -1.4 -0.6 +0.2 +0.0
no phage control no phage control -0.7 -0.4 -1.0 -2.8 -0.3
phage phage_bap4 -1.4 -0.9 -1.1 -1.2 -0.1
complex community Community=arabino-guar; Passage=4 -1.4 -1.1 -0.1 -2.1 +0.1
complex community Community=guar; Passage=4 +0.1 -0.4 -0.5 -1.5 -2.4
complex community Community=arabino-guar; Passage=4 -0.5 -1.5 -2.0 -0.6 -0.0
complex community Community=guar; Passage=4 -4.6 +0.5 -0.2 -0.3 +0.1
complex community Community=guar; Passage=4 -2.7 -0.4 -0.5 -0.6 -0.3
no phage control no phage control -1.1 -0.7 -1.4 -0.9 -0.0
phage phage_bap4 -0.9 -0.9 -0.9 -1.2 -0.1
no phage control no phage control -1.3 -0.6 -1.0 -1.0 +0.0
complex community Community=arabino-guar; Passage=4 -1.1 -0.6 -1.4 -1.0 +0.5
no phage control no phage control -0.6 -0.5 -1.4 -0.6 -0.2
complex community Community=Kojac gum; Passage=4 -0.6 +0.3 -0.7 -1.9 -0.2
complex community Community=Locust bean gum; Passage=1 -1.2 -0.8 -0.4 -0.6 +0.0
phage phage_bap4 -0.3 -0.4 -1.1 -0.8 -0.3
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -2.1 +0.1 -1.0 -0.3 +0.8
complex community Community=arabino-guar; Passage=4 -2.9 +0.3 -0.3 +0.4 -0.0
phage phage_bap4 -1.2 -0.5 -0.8 -0.6 +0.6
complex community Community=Locust bean gum; Passage=4 -0.4 -0.2 +0.1 -2.4 +0.8
vitamin M9 with Supernatant from Cyptococcus -0.8 +0.4 -0.6 -0.7 -0.4
complex community Community=Kojac gum; Passage=1 -0.2 +0.0 -0.9 -0.8 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -1.0 +0.4 +0.1 -0.6 -0.6
vitamin M9 with Supernatant from Cyptococcus +0.5 +0.4 -0.9 -1.2 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -1.7 +0.2 -0.2 +0.8 -0.2
complex community Community=Locust bean gum; Passage=4 +0.2 -0.8 -0.7 +0.2 +0.4
complex community Community=Locust bean gum; Passage=4 +0.6 -0.4 -0.4 -0.6 +0.8
vitamin M9 with calcium pantothenate 10 mg/mL +0.7 +0.4 -0.0 -0.7 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.7 +0.4 -0.5 +0.3 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +1.1 +0.5 -0.1 +0.5 +0.0
remove
GFF2341
plot		 remove
GFF2342
plot		 remove
GFF2343		 remove
GFF2344
plot		 remove
GFF2345
plot