Fitness for 5 genes in Hydrogenophaga sp. GW460-11-11-14-LB1

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500 ntGFF2329 and GFF2330 are separated by 2 nucleotidesGFF2330 and GFF2331 overlap by 4 nucleotidesGFF2331 and GFF2332 overlap by 4 nucleotidesGFF2332 and GFF2333 are separated by 14 nucleotides GFF2329 - TRAP-type C4-dicarboxylate transport system, large permease component, at 1,213,450 to 1,214,757 GFF2329 GFF2330 - 3-(3-hydroxy-phenyl)propionate hydroxylase (EC 1.14.13.-), at 1,214,760 to 1,216,265 GFF2330 GFF2331 - Quinone oxidoreductase (EC 1.6.5.5), at 1,216,262 to 1,217,308 GFF2331 GFF2332 - 3-oxoadipate CoA-transferase subunit A (EC 2.8.3.6), at 1,217,305 to 1,218,006 GFF2332 GFF2333 - 3-oxoadipate CoA-transferase subunit B (EC 2.8.3.6), at 1,218,021 to 1,218,674 GFF2333
Group Condition GFF2329 GFF2330 GFF2331 GFF2332 GFF2333
carbon source Ying_AminoAcid20 rep A; time point 3 -0.3 -0.0 -0.3 -0.3 +0.2
carbon source Ying_sugar7 rep B; time point 2 -0.1 -0.3 -0.3 -0.0 +0.1
carbon source Ying_OrganicAcid7 rep A; time point 3 -0.0 +0.1 -0.6 -0.2 +0.1
carbon source Ying_AminoAcid20 rep C; time point 3 -0.0 +0.1 -0.4 -0.1 +0.2
carbon source Ying_OrganicAcid7 rep B; time point 3 -0.1 -0.1 -0.2 -0.1 +0.4
carbon source Ying_OrganicAcid7 rep C; time point 2 -0.1 -0.2 -0.2 +0.1 +0.3
carbon source Ying_sugar7 rep B; time point 3 -0.3 +0.2 +0.0 -0.1 +0.1
carbon source Ying_OrganicAcid7 rep C; time point 1 -0.2 -0.2 -0.1 +0.3 +0.2
carbon source Ying_sugar7 rep C; time point 1 +0.1 -0.1 -0.3 -0.1 +0.4
carbon source Ying_Nucleobase14 rep A; time point 1 -0.1 -0.2 +0.0 -0.1 +0.5
carbon source Ying_all64 rep C; time point 1 +0.3 -0.2 -0.1 +0.1 +0.1
carbon source Ying_Others16 rep A; time point 1 +0.3 -0.2 -0.2 +0.1 +0.2
carbon source Ying_AminoAcid20 rep B; time point 3 -0.0 +0.4 -0.4 +0.2 +0.1
carbon source Ying_Others16 rep C; time point 1 +0.1 -0.1 -0.3 +0.3 +0.2
carbon source Ying_OrganicAcid7 rep B; time point 2 -0.0 -0.2 -0.2 +0.3 +0.4
carbon source Ying_sugar7 rep B; time point 1 +0.1 -0.2 -0.2 +0.2 +0.4
carbon source Ying_OrganicAcid7 rep A; time point 1 -0.0 -0.4 +0.1 +0.2 +0.4
carbon source Ying_Nucleobase14 rep B; time point 2 +0.2 -0.3 -0.1 +0.1 +0.3
carbon source Ying_Others16 rep A; time point 2 +0.0 -0.1 -0.2 +0.1 +0.5
carbon source Ying_Others16 rep C; time point 2 +0.4 -0.5 -0.0 +0.2 +0.4
carbon source Ying_sugar7 rep A; time point 1 +0.2 -0.0 -0.1 -0.1 +0.4
carbon source Ying_OrganicAcid7 rep B; time point 1 +0.3 +0.1 -0.4 +0.3 +0.2
carbon source Ying_Nucleobase14 rep A; time point 2 +0.1 -0.3 +0.3 -0.0 +0.3
carbon source Ying_AminoAcid20 rep B; time point 2 +0.1 -0.1 -0.1 +0.1 +0.6
carbon source Ying_all64 rep B; time point 1 +0.5 -0.3 -0.2 +0.2 +0.4
carbon source Ying_sugar7 rep C; time point 2 +0.2 -0.2 +0.3 +0.2 +0.2
carbon source Ying_sugar7 rep A; time point 2 +0.3 -0.0 +0.0 +0.2 +0.4
carbon source Ying_AminoAcid20 rep C; time point 2 +0.3 +0.1 +0.2 +0.1 +0.2
carbon source Ying_all64 rep C; time point 3 +0.2 +0.2 -0.8 +0.4 +1.0
carbon source Ying_all64 rep C; time point 2 +0.2 +0.0 -0.6 +0.6 +0.8
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