Fitness for 5 genes in Pseudomonas simiae WCS417

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500 ntPS417_01165 and PS417_01170 are separated by 357 nucleotidesPS417_01170 and PS417_01175 are separated by 117 nucleotidesPS417_01175 and PS417_01180 are separated by 140 nucleotidesPS417_01180 and PS417_01185 overlap by 4 nucleotides PS417_01165: PS417_01165 - transcription accessory protein, at 255,712 to 258,036 _01165 PS417_01170: PS417_01170 - chemotaxis protein CheY, at 258,394 to 259,134 _01170 PS417_01175: PS417_01175 - ATPase, at 259,252 to 260,565 _01175 PS417_01180: PS417_01180 - ribosomal protein S6 modification protein, at 260,706 to 261,611 _01180 PS417_01185: PS417_01185 - ribosomal protein S6 modification protein, at 261,608 to 262,090 _01185
Group Condition PS417_01165 PS417_01170 PS417_01175 PS417_01180 PS417_01185
carbon source L-Valine (C) +0.2 N.D. N.D. -3.0 -2.3
carbon source L-Valine (C) +0.2 N.D. N.D. -3.0 -1.5
solid stress Fraxetin 3 mM; solid stress -0.7 N.D. N.D. -1.3 -0.9
solid stress Fraxetin 3 mM; solid stress -0.8 N.D. N.D. -1.3 -0.7
stress Doxycycline hyclate 0.001 mg/ml -0.8 N.D. N.D. -1.0 -0.9
liquid stress 80% Methanol 3 mM; liquid stress -0.1 N.D. N.D. -0.3 -2.2
solid stress Fraxetin 3 mM; solid stress -0.5 N.D. N.D. -1.2 -0.8
liquid stress 80% Methanol 3 mM; liquid stress -0.2 N.D. N.D. -0.4 -1.8
stress Gentamicin 0.008 mg/ml -1.5 N.D. N.D. -0.2 -0.4
liquid stress Fraxetin 3 mM; liquid stress -0.3 N.D. N.D. -0.0 -1.8
liquid stress Fraxetin 3 mM; liquid stress -0.2 N.D. N.D. -0.1 -1.7
solid stress Fraxetin 3 mM; solid stress -0.5 N.D. N.D. -0.9 -0.6
liquid stress Fraxetin 3 mM; liquid stress -0.2 N.D. N.D. -0.2 -1.6
liquid stress Fraxetin 3 mM; liquid stress -0.2 N.D. N.D. -0.1 -1.6
liquid stress Fraxetin 3 mM; liquid stress -0.2 N.D. N.D. -0.2 -1.5
liquid stress 80% Methanol 3 mM; liquid stress -0.1 N.D. N.D. +0.0 -1.6
stress Nalidixic 0.025 mg/ml -0.7 N.D. N.D. -0.4 -0.6
liquid stress Scopoletin 3 mM; liquid stress -0.1 N.D. N.D. -0.1 -1.4
liquid stress Scopoletin 3 mM; liquid stress -0.1 N.D. N.D. -0.3 -1.2
liquid stress Scopoletin 3 mM; liquid stress -0.2 N.D. N.D. +0.0 -1.4
carbon source 2'-Deoxyinosine 5 mM (C) -0.3 N.D. N.D. -0.8 -0.5
carbon source NAG (C) -0.2 N.D. N.D. -0.8 -0.5
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.1 N.D. N.D. -1.0 +0.4
carbon source Gly-Glu (C) +0.4 N.D. N.D. -0.9 -0.3
stress Cisplatin 0.01 mg/ml -0.8 N.D. N.D. +0.3 +0.5
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -0.2 N.D. N.D. +0.5 +0.8
seeds Growth on radish seeds for 72 hours +0.5 N.D. N.D. +1.0 -0.1
stress R2A with Polymyxin B sulfate 0.002 mg/ml +0.3 N.D. N.D. +0.5 +0.7
stress R2A with Polymyxin B sulfate 0.003 mg/ml +0.2 N.D. N.D. +0.7 +0.8
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=20h_outgrowth_LB; Time=7_days +0.6 N.D. N.D. +0.1 +1.1
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