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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF2316 and GFF2317 are separated by 82 nucleotides
GFF2317 and GFF2318 are separated by 82 nucleotides
GFF2318 and GFF2319 are separated by 92 nucleotides
GFF2319 and GFF2320 are separated by 136 nucleotides
GFF2316 - hypothetical protein, at 2,343,966 to 2,344,223
GFF2316
GFF2317 - RNA polymerase ECF-type sigma factor, at 2,344,306 to 2,345,055
GFF2317
GFF2318 - hypothetical protein, at 2,345,138 to 2,345,269
GFF2318
GFF2319 - DNA-directed RNA polymerase specialized sigma subunit, sigma24-like, at 2,345,362 to 2,346,156
GFF2319
GFF2320 - hypothetical protein, at 2,346,293 to 2,346,415
GFF2320
Group
Condition
GFF2316
GFF2317
GFF2318
GFF2319
GFF2320
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.1
-0.0
-1.3
-0.3
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.7
+0.3
-0.2
-0.1
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
-0.2
-0.3
-0.2
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.3
+0.1
-0.2
-0.1
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.0
+0.2
-0.2
-0.4
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.1
+0.1
-0.1
-0.3
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.3
+0.1
-0.0
-0.1
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.1
-0.0
+0.1
-0.2
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.9
+0.3
+0.8
-0.3
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.3
+0.1
+0.0
-0.5
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.3
+0.1
+0.1
-0.1
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.5
+0.1
+0.6
-0.2
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.0
+0.0
+0.0
-0.1
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.2
+0.2
-0.1
-0.3
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.0
+0.1
+0.1
-0.1
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.2
+0.2
-0.0
-0.3
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.1
+0.2
+0.3
-0.1
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.1
+0.2
+0.2
-0.1
N.D.
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