Fitness for 5 genes in Variovorax sp. SCN45

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 61 experiments or choose conditions or try the comparative fitness browser

500 ntGFF2308 and GFF2309 are separated by 13 nucleotidesGFF2309 and GFF2310 are separated by 54 nucleotidesGFF2310 and GFF2311 are separated by 98 nucleotidesGFF2311 and GFF2312 are separated by 215 nucleotides GFF2308 - Cytochrome oxidase biogenesis protein Sco1/SenC/PrrC, thiol-disulfide reductase involved in Cu(I) insertion into CoxII Cu(A) center, at 359,384 to 360,001 GFF2308 GFF2309 - DNA alkylation repair enzyme, at 360,015 to 360,842 GFF2309 GFF2310 - RNA polymerase sigma factor RpoH, at 360,897 to 361,838 GFF2310 GFF2311 - Putative PRS2 protein, at 361,937 to 362,401 GFF2311 GFF2312 - Regulatory protein, LuxR:Response regulator receiver, at 362,617 to 363,306 GFF2312
Group Condition GFF2308 GFF2309 GFF2310 GFF2311 GFF2312
complex community Community=Locust bean gum; Passage=4 -0.1 -0.4 N.D. -0.2 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.0 -0.4 N.D. -0.0 -0.2
phage phage_bap4 -0.1 -0.4 N.D. -0.2 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL -0.0 -0.3 N.D. -0.1 -0.1
complex community Community=guar; Passage=4 +0.1 -0.6 N.D. +0.2 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL -0.1 -0.2 N.D. -0.2 +0.1
phage phage_bap4 -0.1 -0.2 N.D. -0.1 +0.1
complex community Community=Locust bean gum; Passage=4 -0.1 -0.7 N.D. +0.2 +0.4
complex community Community=Locust bean gum; Passage=4 -0.1 -0.1 N.D. +0.2 -0.2
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.1 +0.0 N.D. +0.0 -0.2
complex community Community=guar; Passage=4 -0.2 -0.0 N.D. +0.2 -0.1
complex community Community=guar; Passage=4 -0.3 -0.1 N.D. -0.1 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.1 +0.2 N.D. -0.1 -0.1
phage phage_bap4 -0.1 -0.1 N.D. -0.1 +0.2
vitamin M9 with Supernatant from Cyptococcus -0.1 +0.2 N.D. -0.1 -0.0
complex community Community=guar; Passage=4 +0.1 +0.1 N.D. +0.1 -0.2
complex community Community=arabino-guar; Passage=4 -0.3 +0.1 N.D. +0.0 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL +0.0 -0.2 N.D. -0.0 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.0 +0.2 N.D. -0.0 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL +0.0 -0.2 N.D. +0.1 +0.2
complex community Community=Kojac gum; Passage=4 +0.2 -0.1 N.D. +0.2 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 +0.3 N.D. +0.0 -0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.0 +0.1 N.D. -0.0 +0.2
vitamin M9 with Supernatant from Cyptococcus -0.0 +0.3 N.D. -0.0 +0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.1 +0.3 N.D. -0.0 +0.0
complex community Community=arabino-guar; Passage=4 -0.1 +0.2 N.D. +0.0 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.1 +0.2 N.D. +0.1 -0.1
vitamin M9 with Supernatant from Cyptococcus +0.1 +0.0 N.D. -0.0 +0.2
complex community Community=Locust bean gum; Passage=4 -0.3 +0.2 N.D. +0.0 +0.7
complex community Community=arabino-guar; Passage=4 -0.0 +0.7 N.D. +0.2 -0.0
remove
GFF2308
plot		 remove
GFF2309
plot		 remove
GFF2310		 remove
GFF2311
plot		 remove
GFF2312
plot