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Cofit
Protein
Homologs
Fitness for 5 genes in
Variovorax sp. SCN45
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF2297 and GFF2298 are separated by 43 nucleotides
GFF2298 and GFF2299 are separated by 12 nucleotides
GFF2299 and GFF2300 are separated by 25 nucleotides
GFF2300 and GFF2301 overlap by 1 nucleotides
GFF2297 - Cytochrome c oxidase polypeptide II (EC 1.9.3.1), at 350,553 to 351,731
GFF2297
GFF2298 - Cytochrome c oxidase polypeptide I (EC 1.9.3.1), at 351,775 to 353,415
GFF2298
GFF2299 - hypothetical protein, at 353,428 to 353,544
GFF2299
GFF2300 - Cytochrome oxidase biogenesis protein Cox11-CtaG, copper delivery to Cox1, at 353,570 to 354,196
GFF2300
GFF2301 - no description, at 354,196 to 354,417
GFF2301
Group
Condition
GFF2297
GFF2298
GFF2299
GFF2300
GFF2301
complex community
Community=Locust bean gum; Passage=4
-2.4
-2.3
N.D.
-2.8
-0.7
complex community
Community=arabino-guar; Passage=4
-2.6
-2.3
N.D.
-2.7
-0.1
complex community
Community=arabino-guar; Passage=4
-2.3
-2.1
N.D.
-2.7
-0.2
complex community
Community=Locust bean gum; Passage=4
-2.2
-2.0
N.D.
-3.2
+0.5
complex community
Community=arabino-guar; Passage=4
-2.0
-2.2
N.D.
-2.6
-0.0
complex community
Community=Locust bean gum; Passage=4
-2.3
-2.3
N.D.
-2.2
+0.3
complex community
Community=guar; Passage=4
-1.7
-1.6
N.D.
-2.3
-0.5
complex community
Community=arabino-guar; Passage=4
-2.8
-2.3
N.D.
-1.7
+0.9
complex community
Community=guar; Passage=4
-2.2
-2.0
N.D.
-2.0
+0.1
complex community
Community=guar; Passage=4
-2.3
-1.8
N.D.
-2.0
+0.2
complex community
Community=guar; Passage=4
-1.9
-1.9
N.D.
-1.5
+0.4
complex community
Community=Locust bean gum; Passage=4
-1.9
-1.8
N.D.
-1.4
+0.6
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-1.0
-1.0
N.D.
-1.4
-0.0
vitamin
M9 with calcium pantothenate 10 mg/mL
-0.9
-1.0
N.D.
-1.2
-0.4
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-1.1
-1.1
N.D.
-1.2
-0.1
vitamin
M9 with calcium pantothenate 10 mg/mL
-1.0
-1.0
N.D.
-1.2
-0.2
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-1.1
-1.2
N.D.
-1.3
+0.1
vitamin
M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL
-1.0
-0.9
N.D.
-1.2
-0.3
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-0.9
-1.0
N.D.
-1.1
-0.3
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
-1.0
-0.9
N.D.
-1.2
-0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-1.0
-1.0
N.D.
-1.4
+0.3
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-1.0
-0.9
N.D.
-1.2
-0.1
vitamin
M9 with calcium pantothenate 10 mg/mL
-1.1
-0.9
N.D.
-0.9
-0.2
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-1.0
-1.2
N.D.
-1.4
+0.6
vitamin
M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL
-0.9
-0.9
N.D.
-1.3
+0.2
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-0.9
-1.0
N.D.
-1.2
+0.3
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
-0.9
-1.0
N.D.
-1.0
+0.0
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-0.9
-1.0
N.D.
-1.3
+1.0
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-0.8
-0.9
N.D.
-0.9
+0.4
complex community
Community=Kojac gum; Passage=4
-1.0
-1.0
N.D.
-0.6
+0.4
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