Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_11680	PS417_11690	PS417_11695	PS417_11700	PS417_11705
nophagecontrol	TIme6-nophage	+0.1	-0.0	-0.1	-0.5	-5.6
agar plate interaction control	Taped volatile agar plate with no fungus	+0.0	-0.1	-0.0	+0.1	-5.5
stress	R2A with Fusaric 120 ug/mL	-0.2	-0.1	-0.1	-2.1	-2.8
phage moi 100	Time6-phageFRS	+0.2	-0.0	+0.0	-2.1	-3.4
stress	R2A with Fusaric 120 ug/mL	-0.4	+0.1	-0.2	-2.0	-2.6
no phage control	Time6-nophage	+0.0	-0.1	-0.1	-1.6	-3.2
stress	R2A with Fusaric 120 ug/mL	-0.2	-0.0	-0.1	-2.1	-2.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.2	-0.2	+0.0	-0.0	-4.8
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.2	+0.2	-0.0	+0.0	-5.0
nophagecontrol	TIme6-nophage	-0.2	+0.0	-0.1	-0.6	-3.9
stress	R2A with Fusaric 120 ug/mL	-0.3	-0.2	-0.2	-1.9	-1.8
stress	R2A with Fusaric 120 ug/mL	+0.1	-0.1	-0.1	-2.0	-2.2
stress	R2A with Fusaric 120 ug/mL	-0.1	-0.1	-0.2	-1.8	-2.1
agar plate interaction control	Taped volatile agar plate with no fungus	+0.1	-0.2	+0.1	-0.3	-3.9
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	+0.1	+0.4	+0.3	+0.1	-5.0
carbon source	octanoate (C)	-0.3	-0.0	+0.0	-1.9	-1.6
carbon source	octanoate (C)	+0.3	-0.0	-0.0	-2.2	-1.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.4	-0.1	-0.0	+0.1	-3.9
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	+0.4	-0.3	-0.0	+0.5	-4.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.2	-0.0	-0.2	+0.7	-4.2
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.3	-0.0	+0.1	-0.4	-3.0
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-0.4	+0.2	+0.1	+0.1	-3.5
agar plate interaction	Taped volatile agar plate with Trichoderma atroviridae IMI	-0.1	+0.1	+0.0	+0.2	-3.6
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.1	+0.1	+0.0	+0.4	-3.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	+0.1	-0.1	-0.3	+1.2	-3.7
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-0.1	+0.3	+0.3	+0.2	-3.0
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-0.1	+0.1	+0.2	+0.5	-2.7
supernatant	Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x	+0.5	+0.1	+0.3	-0.6	-2.0
supernatant	LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.25x	-0.0	+1.4	+1.4	-2.3	-2.0
supernatant	LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x	+0.1	+2.3	+2.1	+0.9	-3.2