Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF2289 and GFF2290 are separated by 111 nucleotidesGFF2290 and GFF2291 are separated by 81 nucleotidesGFF2291 and GFF2292 are separated by 16 nucleotidesGFF2292 and GFF2293 are separated by 136 nucleotides GFF2289 - Glutathione-regulated potassium-efflux system ancillary protein KefF, at 345,207 to 345,914 GFF2289 GFF2290 - Chromosome partitioning protein ParA, at 346,026 to 346,646 GFF2290 GFF2291 - Nodulation protein N-related dehydratase, at 346,728 to 347,189 GFF2291 GFF2292 - hypothetical protein, at 347,206 to 347,499 GFF2292 GFF2293 - tRNA (cytidine(34)-2'-O)-methyltransferase (EC 2.1.1.207), at 347,636 to 348,097 GFF2293
Group Condition GFF2289 GFF2290 GFF2291 GFF2292 GFF2293
complex community Community=arabino-guar; Passage=4 +0.2 -0.3 -0.2 N.D. -2.1
complex community Community=guar; Passage=4 +0.1 +0.0 -0.3 N.D. -1.7
phage phage_bap4 -0.0 -0.3 -0.7 N.D. -0.5
complex community Community=arabino-guar; Passage=4 -0.2 -0.5 -0.3 N.D. -0.3
phage phage_bap4 -0.2 -0.2 -0.1 N.D. -0.3
phage phage_bap4 -0.3 -0.1 -0.4 N.D. -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.0 -0.1 -0.5 N.D. -0.2
phage phage_bap4 -0.1 +0.1 -0.4 N.D. -0.4
phage phage_bap4 -0.2 +0.0 -0.1 N.D. -0.5
complex community Community=arabino-guar; Passage=4 +0.3 +0.2 -1.3 N.D. +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.2 -0.0 -0.5 N.D. +0.0
complex community Community=Kojac gum; Passage=1 +0.0 -0.1 -0.7 N.D. +0.1
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.2 +0.1 +0.0 N.D. -0.6
complex community Community=arabino-guar; Passage=4 -0.2 -0.6 +0.3 N.D. -0.1
complex community Community=Locust bean gum; Passage=4 +0.3 -0.3 +0.3 N.D. -0.8
complex community Community=Locust bean gum; Passage=4 +0.2 -0.6 -0.1 N.D. -0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.3 -0.2 +0.1 N.D. -0.2
complex community Community=Locust bean gum; Passage=4 +0.0 -0.2 +0.1 N.D. -0.5
no phage control no phage control +0.1 -0.0 +0.2 N.D. -0.7
complex community Community=guar; Passage=4 +0.4 -0.2 -0.4 N.D. -0.2
complex community Community=Locust bean gum; Passage=4 -0.0 -0.8 +0.3 N.D. +0.3
complex community Community=Locust bean gum; Passage=1 +0.1 +0.1 -0.1 N.D. -0.4
vitamin M9 with Supernatant from Cyptococcus -0.2 -0.1 +0.3 N.D. -0.1
phage phage_bap4 +0.0 +0.2 +0.1 N.D. -0.4
vitamin M9 with Supernatant from Cyptococcus +0.1 -0.1 +0.3 N.D. -0.2
complex community Community=guar; Passage=4 +0.2 +0.5 +0.1 N.D. -0.5
complex community Community=guar; Passage=4 -0.3 -0.1 -0.4 N.D. +1.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.0 +0.1 +0.5 N.D. -0.2
phage phage_bap4 +0.0 -0.2 +0.2 N.D. +0.5
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.1 +0.2 +0.4 N.D. +0.0
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