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Cofit
Protein
Homologs
Fitness for 5 genes in
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF2274 and GFF2275 are separated by 18 nucleotides
GFF2275 and GFF2276 are separated by 328 nucleotides
GFF2276 and GFF2277 are separated by 69 nucleotides
GFF2277 and GFF2278 are separated by 11 nucleotides
GFF2274 - Predicted rhamnogalacturonide-specific TRAP-type transporter, small transmembrane component RhiB, at 63,617 to 64,132
GFF2274
GFF2275 - Predicted rhamnogalacturonide-specific TRAP-type transporter, substrate-binding component RhiA, at 64,151 to 65,134
GFF2275
GFF2276 - Manganese superoxide dismutase (EC 1.15.1.1), at 65,463 to 66,083
GFF2276
GFF2277 - Uncharacterized protein conserved in bacteria, at 66,153 to 66,842
GFF2277
GFF2278 - Putative inner membrane protein, at 66,854 to 67,249
GFF2278
Group
Condition
GFF2274
GFF2275
GFF2276
GFF2277
GFF2278
phage
Ffm_phage 10 MOI; agar plate assay
+0.0
-0.2
-3.9
-0.7
+0.4
phage
6H2_phage 10 MOI; agar plate assay
+0.1
-0.3
-4.2
+0.5
+0.2
phage
phi19h1_phage 15 MOI
+0.1
-0.1
-3.4
+0.5
-0.0
phage
6F2_phage 15 MOI
+0.1
+0.0
-2.1
-0.2
-0.1
phage
phi19h1_phage 15 MOI
-0.2
+0.0
-2.0
+0.3
-0.1
nophagecontrol
No phage control
+0.0
-0.1
-1.8
+0.1
-0.2
phage
LB_plus_SM_buffer with ES18h1_phage 0.75 MOI
-0.1
-0.2
-0.6
-0.7
-0.2
phage
6F2_phage 15 MOI
+0.2
-0.0
-1.8
-0.1
-0.0
phage
phi19h1_phage 15 MOI
+0.0
-0.0
-1.8
+0.2
-0.0
phage
LB_plus_SM_buffer with 6C2_phage 15 MOI
-0.1
+0.1
-1.3
-0.2
+0.1
micoeukaryotes
Acanthamoeba sp., muxed culture-1
+0.1
+0.1
-1.8
+0.4
-0.0
phage
LB_plus_SM_buffer with EIP16_phage 0.875 MOI
-0.1
-0.1
-0.8
-0.1
+0.3
phage
LB_plus_SM_buffer with 6F2_phage 1.875 MOI
+0.2
+0.0
-0.9
-0.2
+0.0
phage
LB_plus_SM_buffer with 6C2_phage 0.25 MOI
+0.0
-0.2
-1.1
+0.2
+0.4
phage
LB_plus_SM_buffer with FelixO1_phage (wt new) 0.0075 MOI
+0.2
+0.1
-1.0
+0.2
-0.0
phage
LB_plus_SM_buffer with 6F2_phage 0.1875 MOI
+0.3
-0.0
-0.8
+0.3
-0.2
phage
LB_plus_SM_buffer with phi19h1_phage 0.1875 MOI
-0.1
+0.1
-0.8
+0.2
+0.4
phage
LB_plus_SM_buffer with 6H2_phage 0.5 MOI
+0.3
-0.0
+0.9
+0.2
+0.2
phage
LB_plus_SM_buffer with 8C2_phage 15 MOI
-0.2
+0.0
+1.7
-0.0
-0.0
phage
LB_plus_SM_buffer with ES18h1_phage 0.00075 MOI
-0.1
-0.2
+1.4
+0.5
-0.1
phage
LB_plus_SM_buffer with P22_phage 15 MOI
-0.3
+0.2
+2.0
-0.1
-0.2
phage
LB_plus_SM_buffer with S16_phage 15 MOI
-0.2
-0.0
+1.8
-0.2
+0.3
phage
LB_plus_SM_buffer with FelixO1_phage (LP_new) 15 MOI
+0.0
+0.5
+1.0
+0.1
+0.2
phage
LB_plus_SM_buffer with S16_phage 15 MOI
-0.1
+0.0
+1.6
-0.1
+0.5
phage
LB_plus_SM_buffer with FelixO1_phage (old) 15 MOI
-0.0
+0.3
+1.5
+0.1
+0.3
phage
LB_plus_SM_buffer with FelixO1_phage 0.05 MOI
+0.8
-0.0
+1.5
+0.2
-0.2
phage
LB_plus_SM_buffer with Br60_phage 0.0005 MOI
+0.1
-0.1
+1.2
+1.0
+0.8
phage
LB_plus_SM_buffer with FelixO1_phage (old) 15 MOI
+0.2
+0.4
+1.8
+0.2
+0.3
phage
LB_plus_SM_buffer with FelixO1_phage (wt_new) 2 MOI
-0.3
+0.5
+2.6
+0.0
+0.1
phage
LB_plus_SM_buffer with FelixO1_phage (wt_new) 2 MOI
+0.1
+0.3
+2.6
+0.3
+0.3
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