Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_11580	PS417_11585	PS417_11590	PS417_11595	PS417_11600
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	N.D.	-2.7	+0.1	+0.2	-1.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	N.D.	-2.4	-0.4	+0.1	-0.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	N.D.	-2.1	-0.4	-0.2	+0.0
carbon source	Deoxyribonucleic from herring sperm 10 mg/mL (C)	N.D.	-1.8	+0.2	-0.2	-0.3
stress	methylglyoxal 0.032 vol%	N.D.	-1.2	-0.7	+0.0	-0.1
nitrogen source	Inosine (N)	N.D.	-0.4	-0.4	-0.7	-0.5
soil	soil sample 5; outgrowth in LB	N.D.	-0.9	-0.1	-0.5	-0.3
phage	P. simiae Grant Run MOI 0.1	N.D.	-1.6	-0.2	+0.0	+0.2
rhizosphere	rhizosphere sample 2; outgrowth in LB	N.D.	-0.7	+0.1	-0.1	-0.8
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	N.D.	-2.0	+0.2	+0.2	+0.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	N.D.	-1.3	-0.0	+0.3	-0.2
soil	soil sample 4; outgrowth in LB	N.D.	-1.5	+0.3	+0.2	+0.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	N.D.	-1.4	+0.1	+0.1	+0.3
agar plate interaction	Taped volatile agar plate with Trichoderma atroviridae IMI	N.D.	-1.1	-0.1	+0.4	+0.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	N.D.	-0.8	+0.2	-0.4	+0.4
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.1x	N.D.	-0.8	-0.2	-0.0	+0.6
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamic; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	N.D.	-1.2	+0.5	+0.3	-0.0
exudates	RCH2_defined_glucose with Brachypodium distachyon 27-day exudates 1x	N.D.	-0.9	+0.2	+0.3	+0.5
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	N.D.	+0.7	-0.6	-0.2	+0.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	N.D.	+0.8	-0.7	+0.0	+0.5
carbon source	Carbon source L-Citrulline 5 mM	N.D.	+1.3	-0.1	-0.4	-0.0
seeds	Growth on radish seeds for 72 hours	N.D.	+1.2	+0.3	-0.0	-0.8
stress	1-ethyl-3-methylimidazolium chloride 200 mM	N.D.	+0.6	-0.4	+0.2	+0.6
phage	JP1 MOI 10	N.D.	+0.7	-0.3	+0.3	+0.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	N.D.	-0.3	+0.6	+0.5	+0.2
phage	JP1 MOI 10	N.D.	+1.4	-0.4	-0.0	+0.2
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	N.D.	+1.4	-0.2	+0.3	+0.0
seeds	Growth on radish seeds for 72 hours	N.D.	-0.3	+0.6	+0.5	+0.8
rhizosphere	rhizosphere sample 8; outgrowth in LB	N.D.	+0.2	+0.7	+0.3	+0.4
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	N.D.	+0.6	+0.5	-0.1	+0.8