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Cofit
Protein
Homologs
Fitness for 5 genes in
Variovorax sp. SCN45
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF225 and GFF226 are separated by 16 nucleotides
GFF226 and GFF227 overlap by 1 nucleotides
GFF227 and GFF228 are separated by 147 nucleotides
GFF228 and GFF229 are separated by 27 nucleotides
GFF225 - Permeases of the major facilitator superfamily, at 251,639 to 252,835
GFF225
GFF226 - ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) / ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines), at 252,852 to 254,492
GFF226
GFF227 - ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines), at 254,492 to 255,532
GFF227
GFF228 - ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines), at 255,680 to 256,720
GFF228
GFF229 - ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines), at 256,748 to 258,562
GFF229
Group
Condition
GFF225
GFF226
GFF227
GFF228
GFF229
complex community
Community=arabino-guar; Passage=4
-0.2
-1.2
-1.1
-1.4
-1.2
complex community
Community=arabino-guar; Passage=4
-0.2
-1.6
-1.1
-1.0
-1.0
complex community
Community=arabino-guar; Passage=4
-0.6
-1.1
-1.1
-0.9
-1.0
complex community
Community=arabino-guar; Passage=4
-0.0
-1.3
-1.1
-1.3
-0.8
complex community
Community=guar; Passage=4
-0.3
-0.9
-1.0
-1.3
-0.9
complex community
Community=guar; Passage=4
+0.1
-1.4
-0.8
-1.0
-1.1
complex community
Community=guar; Passage=4
-0.4
-1.4
-0.8
-0.7
-0.7
complex community
Community=guar; Passage=4
-0.2
-1.0
-0.7
-1.0
-0.7
complex community
Community=Locust bean gum; Passage=4
+0.4
-1.1
-0.8
-0.9
-0.8
complex community
Community=Locust bean gum; Passage=4
+0.2
-1.1
-0.6
-0.6
-0.7
complex community
Community=Locust bean gum; Passage=4
+0.7
-0.7
-0.8
-1.1
-0.9
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
+0.1
-0.8
-0.5
-0.7
-0.5
complex community
Community=Locust bean gum; Passage=4
+0.5
-0.7
-0.8
-0.6
-0.8
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-0.0
-0.6
-0.5
-0.7
-0.5
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
+0.1
-0.7
-0.5
-0.4
-0.7
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-0.1
-0.5
-0.5
-0.4
-0.6
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-0.0
-0.7
-0.5
-0.5
-0.5
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
+0.0
-0.6
-0.5
-0.5
-0.4
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-0.1
-0.5
-0.5
-0.4
-0.6
complex community
Community=Kojac gum; Passage=4
+0.4
-0.8
-0.5
-0.3
-0.8
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-0.2
-0.5
-0.4
-0.4
-0.4
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-0.0
-0.6
-0.4
-0.3
-0.4
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
+0.0
-0.4
-0.4
-0.5
-0.4
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
-0.0
-0.5
-0.4
-0.3
-0.4
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
+0.0
-0.2
-0.3
-0.6
-0.5
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
-0.0
-0.5
-0.4
-0.3
-0.4
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
-0.1
-0.4
-0.4
-0.3
-0.3
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
-0.2
-0.6
-0.3
-0.1
-0.4
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
-0.2
-0.4
-0.2
-0.4
-0.3
vitamin
M9 with calcium pantothenate 10 mg/mL
-0.1
-0.3
-0.2
-0.4
-0.3
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