Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_11545	PS417_11550	PS417_11555	PS417_11560	PS417_11565
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-1.7	-0.3	-0.5	N.D.	-0.0
soil	soil sample 7; outgrowth in LB	-0.7	-0.3	-0.6	N.D.	-0.2
stress	6-methoxy-2(3H)-benzoxazolone 2.5 mM	-0.7	-0.2	-0.8	N.D.	-0.1
stress	methylglyoxal 0.032 vol%	-0.4	-0.5	-1.0	N.D.	+0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.4	-0.4	-1.2	N.D.	+0.3
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-0.2	-0.3	-1.0	N.D.	-0.2
agar plate interaction	Taped volatile agar plate with Trichoderma atroviridae IMI	-0.1	-0.2	-1.1	N.D.	-0.2
phage	JP1 MOI 10	-1.0	-0.7	+0.3	N.D.	-0.1
rhizosphere	rhizosphere sample 2; outgrowth in LB	+0.7	-0.9	-0.7	N.D.	-0.4
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.7	-0.3	+0.2	N.D.	-0.5
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.5	+0.1	-0.8	N.D.	-0.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.0	-0.8	-0.8	N.D.	+0.6
carbon source	2'-Deoxyinosine 5 mM (C)	-0.6	+0.3	-0.6	N.D.	-0.2
soil	soil sample 3; outgrowth in LB	+0.6	-0.6	-0.7	N.D.	-0.2
phage	Wcs_1	+0.3	-0.6	-0.5	N.D.	-0.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.0	-0.1	+0.7	N.D.	-0.4
carbon source	2'-Deoxyinosine 5 mM (C)	-0.2	+0.4	-0.9	N.D.	-0.0
phage	P. simiae OR Antrim MOI 0.1	+0.6	-0.4	-0.4	N.D.	-0.3
in planta	Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+0.0	+0.5	-0.6	N.D.	-0.4
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.1	+0.4	+0.7	N.D.	-0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.0	-0.8	+0.7	N.D.	-0.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.4	+0.2	+0.9	N.D.	-0.3
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.6	-0.7	+0.7	N.D.	-0.1
nophagecontrol	Only library	+0.6	-0.6	+0.7	N.D.	-0.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.1	-0.1	+1.0	N.D.	-0.3
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.5	+0.1	+0.7	N.D.	-0.5
carbon source	L-Valine (C)	+0.8	-0.3	+0.6	N.D.	-0.2
seeds	Growth on radish seeds for 72 hours	+1.4	-0.1	-0.2	N.D.	-0.1
carbon source	D-Glucose (C)	+0.8	-0.3	+0.5	N.D.	-0.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.4	-0.1	+1.4	N.D.	-0.0