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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF2263 and GFF2264 are separated by 94 nucleotides
GFF2264 and GFF2265 are separated by 18 nucleotides
GFF2265 and GFF2266 overlap by 1 nucleotides
GFF2266 and GFF2267 are separated by 102 nucleotides
GFF2263 - TonB-dependent receptor, at 2,290,397 to 2,293,225
GFF2263
GFF2264 - Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase (EC 2.8.4.4), at 2,293,320 to 2,294,702
GFF2264
GFF2265 - hypothetical protein, at 2,294,721 to 2,295,563
GFF2265
GFF2266 - hypothetical protein, at 2,295,563 to 2,295,763
GFF2266
GFF2267 - Peptidase B (EC 3.4.11.23), at 2,295,866 to 2,297,317
GFF2267
Group
Condition
GFF2263
GFF2264
GFF2265
GFF2266
GFF2267
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.1
-0.1
-0.3
-0.0
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.0
-0.1
+0.1
-0.2
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.0
-0.1
-0.2
+0.1
+0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.1
+0.0
+0.1
-0.1
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.0
-0.0
+0.2
-0.3
+0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.0
+0.2
-0.0
-0.2
-0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.1
-0.0
-0.1
+0.0
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.0
-0.0
-0.2
+0.2
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.1
+0.1
-0.2
+0.3
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.0
+0.1
-0.1
+0.2
-0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.0
+0.1
-0.2
+0.3
-0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.0
+0.2
-0.1
-0.0
+0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.1
+0.3
-0.2
+0.3
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.1
+0.2
-0.1
+0.2
-0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
+0.1
+0.0
+0.4
-0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.0
-0.0
+0.2
+0.5
-0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.1
+0.3
+0.1
+0.4
-0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.2
+0.3
+0.1
+0.5
+0.1
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