Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF2254 and GFF2255 are separated by 8 nucleotidesGFF2255 and GFF2256 are separated by 16 nucleotidesGFF2256 and GFF2257 overlap by 8 nucleotidesGFF2257 and GFF2258 are separated by 96 nucleotides GFF2254 - HYPOTHETICAL/UNKNOWN PROTEIN, at 309,807 to 310,448 GFF2254 GFF2255 - Ribonuclease Z (EC 3.1.26.11), at 310,457 to 311,413 GFF2255 GFF2256 - Uncharacterized protein YcgL, at 311,430 to 312,281 GFF2256 GFF2257 - RNA 3'-terminal phosphate cyclase (EC 6.5.1.4), at 312,274 to 313,311 GFF2257 GFF2258 - 4-hydroxybenzoate transporter, at 313,408 to 314,766 GFF2258
Group Condition GFF2254 GFF2255 GFF2256 GFF2257 GFF2258
complex community Community=arabino-guar; Passage=4 -0.3 -0.5 -0.5 +0.3 -0.8
complex community Community=arabino-guar; Passage=4 -0.4 -0.1 -0.8 +0.5 -0.2
complex community Community=arabino-guar; Passage=4 +0.3 -0.1 -0.2 -0.3 -0.5
complex community Community=Locust bean gum; Passage=4 -0.1 +0.0 +0.7 -0.5 -0.6
complex community Community=guar; Passage=4 +0.3 +0.8 -1.4 -0.6 +0.8
phage phage_bap4 -0.1 +0.2 -0.4 +0.3 +0.1
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.1 -0.1 -0.3 +0.4 +0.2
no phage control no phage control -0.2 +0.3 -0.1 +0.3 -0.1
complex community Community=guar; Passage=4 -0.2 -0.4 +0.0 +0.6 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.3 -0.3 +0.2 -0.0 +0.2
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.1 +0.3 +0.2 -0.4 +0.1
phage phage_bap4 -0.2 +0.6 -0.3 +0.3 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL -0.0 -0.2 +0.1 +0.6 -0.1
phage phage_bap4 +0.3 -0.2 +0.0 +0.3 +0.1
complex community Community=Kojac gum; Passage=4 -0.5 +0.0 +0.4 +0.6 +0.2
phage phage_bap4 -0.2 +0.5 -0.0 +0.4 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.1 +0.2 +0.2 +0.5 +0.0
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.0 +0.0 +0.4 +0.5 -0.2
complex community Community=arabino-guar; Passage=4 +0.4 -0.3 +0.6 +0.5 -0.5
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.1 +0.4 +0.3 +0.2 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.1 +0.1 +0.4 +0.7 -0.3
complex community Community=Locust bean gum; Passage=4 +0.1 +0.3 -0.1 +0.8 -0.2
vitamin M9 with Supernatant from Cyptococcus +0.0 +0.4 +0.4 +0.4 -0.4
vitamin M9 with calcium pantothenate 10 mg/mL +0.1 +0.2 +0.3 +0.4 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.4 +0.4 +0.1 +0.1 +0.1
phage phage_bap4 +0.1 +0.4 +0.4 +0.1 +0.1
vitamin M9 with Supernatant from Cyptococcus +0.3 +0.3 +0.3 +0.4 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.3 +0.2 +0.5 +0.1 +0.2
complex community Community=guar; Passage=4 +0.2 +0.4 +0.4 +0.3 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.2 +0.2 +0.5 +0.3 +0.3
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