Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_11440	PS417_11445	PS417_11450	PS417_11455	PS417_11460
solid stress	Fraxetin 3 mM; solid stress	+0.4	-0.2	-1.2	+0.0	-6.7
solid stress	Fraxetin 3 mM; solid stress	+0.1	-0.6	-0.6	+0.0	-5.3
solid stress	Fraxetin 3 mM; solid stress	-0.2	-0.2	+0.1	-0.4	-5.3
solid stress	Fraxetin 2 mM; solid stress	-0.1	-0.1	+0.1	+0.0	-5.2
solid stress	Fraxetin 3 mM; solid stress	-0.0	-0.3	+0.0	+0.4	-3.9
stress	LB_noSalt with Chloride 1100 mM	+0.2	-2.2	-1.9	+0.3	+0.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-3.8	-0.0	-0.2	+0.0	+0.5
stress	LB_noSalt with Chloride 1100 mM	+0.6	-2.2	-1.6	-0.1	+0.0
solid stress	Fraxetin 2 mM; solid stress	+0.0	-0.1	+0.1	+0.2	-3.3
solid stress	Fraxetin 2 mM; solid stress	-0.4	-0.2	-0.1	+0.0	-2.2
solid stress	Fraxetin 2 mM; solid stress	-0.4	+0.1	+0.2	+0.0	-2.6
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	-2.8	+0.4	+0.1	-0.1	-0.2
seeds	Growth on radish seeds for 72 hours	-1.9	-0.2	-0.1	-0.3	+0.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.7	+0.2	+0.5	-0.8	-0.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.5	-0.0	-0.0	+0.6	-0.5
ecofab	LB in EcoFAB_3.5mL	-1.2	+0.7	-0.1	+0.4	-0.3
soil	soil sample 6; outgrowth in LB	+1.1	-0.4	+0.1	-1.4	+0.1
carbon source	Deoxyribonucleic from herring sperm 10 mg/mL (C)	-1.7	+0.7	+0.4	+0.2	+0.0
phage	JP1 MOI 10	+1.9	+0.0	-0.0	-0.7	-0.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-1.0	+1.9	+0.7	+0.4	-0.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-0.5	+0.7	+0.6	+1.2	+0.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+1.8	+0.5	-0.8	+0.5	+0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.5	+1.9	+1.2	+0.1	-0.1
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	+1.8	+0.8	+0.2	+0.3	+0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.6	+3.0	+1.2	+0.4	+0.0
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.0	+2.0	+2.4	-0.0	+0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.1	+3.0	+2.0	-0.1	+0.1
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.0	+3.1	+2.9	-0.2	+0.2
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.7	+3.9	+3.5	+0.0	-0.1
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.6	+4.2	+3.5	+0.0	+0.0