Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF2229 and GFF2230 are separated by 136 nucleotidesGFF2230 and GFF2231 overlap by 4 nucleotidesGFF2231 and GFF2232 are separated by 34 nucleotidesGFF2232 and GFF2233 are separated by 121 nucleotides GFF2229 - Pca regulon regulatory protein PcaR, at 291,162 to 291,947 GFF2229 GFF2230 - 3-oxoadipate CoA-transferase subunit A (EC 2.8.3.6), at 292,084 to 292,785 GFF2230 GFF2231 - 3-oxoadipate CoA-transferase subunit B (EC 2.8.3.6), at 292,782 to 293,429 GFF2231 GFF2232 - Acetyl-CoA acetyltransferase (EC 2.3.1.9) @ 3-oxoadipyl-CoA thiolase (EC 2.3.1.174), at 293,464 to 294,669 GFF2232 GFF2233 - hypothetical protein, at 294,791 to 295,810 GFF2233
Group Condition GFF2229 GFF2230 GFF2231 GFF2232 GFF2233
complex community Community=guar; Passage=4 -0.4 -0.0 -3.9 +0.4 -0.2
complex community Community=arabino-guar; Passage=4 -0.9 -1.5 -1.7 +0.6 -0.1
complex community Community=guar; Passage=4 +0.1 -2.2 +0.4 -0.1 -0.2
complex community Community=guar; Passage=4 -0.1 -1.1 -1.1 +0.3 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.3 -0.1 -1.0 +0.1 -0.4
complex community Community=Locust bean gum; Passage=4 -1.8 +0.3 +0.5 -1.2 +0.6
complex community Community=Locust bean gum; Passage=4 -0.7 +0.1 -0.5 -0.7 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.2 -0.5 -0.6 -0.2 +0.1
complex community Community=arabino-guar; Passage=4 -1.4 +0.1 +0.0 -0.1 +0.0
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.3 +0.1 -0.8 -0.2 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL -0.6 -0.5 -0.0 -0.3 +0.3
vitamin M9 with Supernatant from Cyptococcus -0.2 -0.4 -0.2 +0.2 -0.5
complex community Community=Locust bean gum; Passage=4 -1.2 -1.0 +0.5 +0.1 +0.7
complex community Community=Kojac gum; Passage=4 -0.1 -0.2 -0.7 +0.2 +0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.2 +0.1 -0.6 -0.3 -0.1
vitamin M9 with Supernatant from Cyptococcus -0.6 +0.2 -0.7 -0.0 +0.3
vitamin M9 with Supernatant from Cyptococcus -0.5 -0.1 -0.5 -0.1 +0.4
complex community Community=Locust bean gum; Passage=1 -0.1 -0.5 -0.4 +0.2 +0.3
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.1 +0.5 -0.9 -0.1 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.4 +0.4 -0.7 +0.1 +0.1
phage phage_bap4 -0.3 +0.4 -0.6 +0.3 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 -0.4 +0.8 -0.1 -0.0
complex community Community=arabino-guar; Passage=4 -0.7 +1.2 -0.2 +0.0 +0.4
phage phage_bap4 -0.2 +0.2 +0.3 +0.6 -0.2
phage phage_bap4 -0.5 -0.1 +0.6 +0.4 +0.2
complex community Community=Kojac gum; Passage=1 -0.2 -0.1 +0.3 +0.8 +0.0
complex community Community=guar; Passage=4 -0.6 -0.3 +0.6 +0.5 +0.8
phage phage_bap4 +0.1 +0.5 +0.7 -0.1 -0.1
complex community Community=Locust bean gum; Passage=4 -0.0 -0.6 +1.2 +0.2 +0.5
complex community Community=arabino-guar; Passage=4 -0.5 +1.2 +1.3 -0.4 -0.1
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