Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_11290	PS417_11295	PS417_11300	PS417_11305	PS417_11310
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	N.D.	-0.9	-0.8	-0.5	-0.4
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Isoleucine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	N.D.	-0.3	-0.8	-0.2	-0.6
agar plate interaction control	Parafilmed volatile agar plate with no fungus	N.D.	-0.2	-0.7	-0.4	-0.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	N.D.	-0.6	-0.3	-0.3	-0.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	N.D.	-0.4	+0.2	-1.0	-0.2
phage	JP1 MOI 1	N.D.	+0.2	-1.0	+0.0	-0.5
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	N.D.	+0.1	-0.5	-0.9	+0.2
phage	P. simiae Grant Run MOI 10	N.D.	-0.4	+0.5	-0.8	-0.4
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	N.D.	-0.6	-0.2	-0.6	+0.4
soil	soil sample 5; outgrowth in LB	N.D.	+0.3	+0.1	-0.4	-1.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	N.D.	+0.4	-1.3	+0.4	-0.4
stress	6-methoxy-2(3H)-benzoxazolone 1.2 mM	N.D.	+0.1	-1.1	+0.3	-0.3
phage	P. simiae OR Antrim MOI 0.1	N.D.	-0.1	-1.0	-0.8	+0.9
seeds	Growth on radish seeds for 72 hours	N.D.	+0.0	+0.3	-1.3	+0.3
soil	soil sample 8; outgrowth in LB	N.D.	-0.1	+0.5	-0.9	-0.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	N.D.	+0.1	-0.5	-0.7	+0.6
carbon source	L-Valine (C)	N.D.	+0.5	+0.5	-1.0	-0.5
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	N.D.	-0.3	-0.8	+0.5	+0.1
carbon source	2'-Deoxyinosine 5 mM (C)	N.D.	-0.2	+0.7	-0.5	-0.3
phage	P. simiae OR Antrim MOI 0.1	N.D.	-0.2	+0.1	-0.8	+0.6
rhizosphere	rhizosphere sample 8; outgrowth in LB	N.D.	+0.1	+0.5	-0.1	-0.8
carbon source	2'-Deoxyinosine 5 mM (C)	N.D.	-0.4	+0.7	-0.7	+0.1
carbon source	2-Deoxy-D-ribonic lithium salt 10 mM (C)	N.D.	-0.0	+0.9	-0.5	-0.6
agar plate interaction control	Taped volatile agar plate with no fungus	N.D.	-0.9	+0.9	+0.0	-0.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	N.D.	+0.1	-0.6	-0.3	+0.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	N.D.	+0.7	+0.3	-0.7	-0.2
stress	Doxycycline hyclate 0.001 mg/ml	N.D.	+0.4	+0.6	+0.5	-0.7
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	N.D.	-0.1	-0.4	+1.5	-0.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	N.D.	+0.7	-0.4	+0.6	+0.1
phage	JP1 MOI 10	N.D.	+0.5	+0.1	+1.0	-0.1