Fitness for 5 genes in Hydrogenophaga sp. GW460-11-11-14-LB1

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500 ntGFF2211 and GFF2212 overlap by 4 nucleotidesGFF2212 and GFF2213 are separated by 7 nucleotidesGFF2213 and GFF2214 overlap by 4 nucleotidesGFF2214 and GFF2215 overlap by 4 nucleotides GFF2211 - Methionyl-tRNA formyltransferase (EC 2.1.2.9), at 1,100,686 to 1,102,422 GFF2211 GFF2212 - hypothetical protein, at 1,102,419 to 1,102,877 GFF2212 GFF2213 - [NiFe] hydrogenase metallocenter assembly protein HypE, at 1,102,885 to 1,103,997 GFF2213 GFF2214 - [NiFe] hydrogenase metallocenter assembly protein HypD, at 1,103,994 to 1,105,154 GFF2214 GFF2215 - [NiFe] hydrogenase metallocenter assembly protein HypC, at 1,105,151 to 1,105,387 GFF2215
Group Condition GFF2211 GFF2212 GFF2213 GFF2214 GFF2215
carbon source Ying_Others16 rep B; time point 2 -0.2 +0.0 N.D. -0.0 -1.2
carbon source Ying_AminoAcid20 rep A; time point 1 -0.5 -0.2 N.D. -0.2 -0.5
carbon source Ying_Others16 rep C; time point 1 -0.4 -0.2 N.D. +0.1 -0.8
carbon source Ying_OrganicAcid7 rep C; time point 1 -0.5 -0.2 N.D. -0.4 -0.1
carbon source Ying_AminoAcid20 rep B; time point 2 +0.0 -0.4 N.D. -0.0 -0.6
carbon source Ying_all64 rep A; time point 1 -0.2 -0.5 N.D. +0.0 -0.3
carbon source Ying_OrganicAcid7 rep C; time point 3 -0.1 +0.2 N.D. -0.0 -0.9
carbon source Ying_Others16 rep B; time point 3 -0.2 -0.2 N.D. -0.1 -0.4
carbon source Ying_AminoAcid20 rep C; time point 2 -0.1 -0.4 N.D. +0.1 -0.4
carbon source Ying_Others16 rep C; time point 2 -0.4 -0.6 N.D. +0.1 +0.2
carbon source Ying_sugar7 rep C; time point 2 -0.6 -0.1 N.D. +0.4 -0.5
carbon source Ying_all64 rep B; time point 3 -0.1 -0.5 N.D. +0.2 -0.3
carbon source Ying_Others16 rep B; time point 1 -0.2 -0.5 N.D. -0.1 +0.3
carbon source Ying_Others16 rep A; time point 3 +0.2 -0.3 N.D. -0.1 -0.3
carbon source Ying_Nucleobase14 rep A; time point 1 -0.4 -0.3 N.D. +0.2 +0.1
carbon source Ying_OrganicAcid7 rep B; time point 2 -0.1 -0.3 N.D. -0.2 +0.3
carbon source Ying_Nucleobase14 rep A; time point 2 -0.0 +0.2 N.D. +0.2 -0.7
carbon source Ying_Others16 rep C; time point 3 -0.2 -0.1 N.D. +0.3 -0.4
carbon source Ying_sugar7 rep B; time point 1 +0.1 -0.5 N.D. -0.1 +0.3
carbon source Ying_OrganicAcid7 rep A; time point 2 -0.5 +0.1 N.D. -0.4 +0.5
carbon source Ying_Nucleobase14 rep B; time point 1 -0.1 -0.3 N.D. +0.1 +0.5
carbon source Ying_all64 rep A; time point 3 -0.1 +0.4 N.D. +0.3 -0.4
carbon source Ying_sugar7 rep A; time point 2 +0.0 +0.1 N.D. -0.2 +0.5
carbon source Ying_sugar7 rep A; time point 1 -0.1 +0.2 N.D. +0.5 -0.1
carbon source Ying_AminoAcid20 rep B; time point 1 -0.0 -0.2 N.D. +0.0 +0.6
carbon source Ying_OrganicAcid7 rep C; time point 2 -0.0 -0.1 N.D. -0.1 +0.8
carbon source Ying_AminoAcid20 rep B; time point 3 +0.5 -0.2 N.D. +0.1 +0.2
carbon source Ying_Nucleobase14 rep C; time point 2 -0.1 +0.1 N.D. +0.2 +0.5
carbon source Ying_AminoAcid20 rep A; time point 3 +0.3 +0.1 N.D. +0.1 +0.4
carbon source Ying_all64 rep C; time point 2 +0.3 +0.3 N.D. -0.1 +0.6
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