Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF219 and GFF220 overlap by 4 nucleotidesGFF220 and GFF221 are separated by 2 nucleotidesGFF221 and GFF222 are separated by 21 nucleotidesGFF222 and GFF223 are separated by 24 nucleotides GFF219 - GTP-binding protein TypA/BipA, at 243,079 to 244,917 GFF219 GFF220 - tRNA pseudouridine(55) synthase (EC 5.4.99.25), at 244,914 to 245,879 GFF220 GFF221 - Ribosome-binding factor A, at 245,882 to 246,253 GFF221 GFF222 - Translation initiation factor 2, at 246,275 to 249,256 GFF222 GFF223 - Transcription termination protein NusA, at 249,281 to 250,774 GFF223
Group Condition GFF219 GFF220 GFF221 GFF222 GFF223
complex community Community=Locust bean gum; Passage=4 -3.4 -0.3 N.D. N.D. N.D.
complex community Community=arabino-guar; Passage=4 -3.2 -0.2 N.D. N.D. N.D.
complex community Community=Locust bean gum; Passage=4 -2.5 -0.1 N.D. N.D. N.D.
complex community Community=arabino-guar; Passage=4 -2.4 -0.1 N.D. N.D. N.D.
complex community Community=arabino-guar; Passage=4 -2.7 +0.3 N.D. N.D. N.D.
complex community Community=guar; Passage=4 -2.1 -0.2 N.D. N.D. N.D.
no phage control no phage control -1.7 -0.2 N.D. N.D. N.D.
complex community Community=Locust bean gum; Passage=4 -1.9 -0.0 N.D. N.D. N.D.
complex community Community=guar; Passage=4 -2.1 +0.2 N.D. N.D. N.D.
phage phage_bap4 -1.6 -0.2 N.D. N.D. N.D.
no phage control no phage control -1.5 -0.3 N.D. N.D. N.D.
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -1.6 -0.2 N.D. N.D. N.D.
no phage control no phage control -1.5 -0.3 N.D. N.D. N.D.
complex community Community=Kojac gum; Passage=4 -1.2 -0.6 N.D. N.D. N.D.
no phage control no phage control -1.4 -0.4 N.D. N.D. N.D.
complex community Community=guar; Passage=4 -1.4 -0.4 N.D. N.D. N.D.
vitamin M9 with Supernatant from Cyptococcus -1.3 -0.4 N.D. N.D. N.D.
complex community Community=Locust bean gum; Passage=4 -1.6 -0.0 N.D. N.D. N.D.
phage phage_bap4 -1.2 -0.5 N.D. N.D. N.D.
vitamin M9 with Supernatant from Cyptococcus -1.2 -0.4 N.D. N.D. N.D.
complex community Community=arabino-guar; Passage=4 -1.2 -0.3 N.D. N.D. N.D.
complex community Community=guar; Passage=4 -1.0 -0.4 N.D. N.D. N.D.
phage phage_bap4 -1.1 -0.3 N.D. N.D. N.D.
phage phage_bap4 -1.0 -0.3 N.D. N.D. N.D.
phage phage_bap4 -0.9 -0.4 N.D. N.D. N.D.
phage phage_bap4 -1.0 -0.3 N.D. N.D. N.D.
vitamin M9 with Supernatant from Cyptococcus -1.2 -0.1 N.D. N.D. N.D.
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -1.2 -0.0 N.D. N.D. N.D.
complex community Community=Kojac gum; Passage=1 -1.1 -0.1 N.D. N.D. N.D.
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.9 +0.2 N.D. N.D. N.D.
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