Private Fitness
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Variovorax sp. SCN45
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 30 experiments (either direction), sorted by average fitness
Or view
all 61 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
GFF2188 and GFF2189 are separated by 68 nucleotides
GFF2189 and GFF2190 are separated by 17 nucleotides
GFF2190 and GFF2191 are separated by 104 nucleotides
GFF2191 and GFF2192 are separated by 0 nucleotides
GFF2188 - Putative periplasmic cytochrome type-C oxidoreductase signal peptide protein (EC 1.-.-.-), at 244,646 to 245,338
GFF2188
GFF2189 - Protocatechuate 3,4-dioxygenase alpha chain (EC 1.13.11.3), at 245,407 to 246,015
GFF2189
GFF2190 - Protocatechuate 3,4-dioxygenase beta chain (EC 1.13.11.3), at 246,033 to 246,758
GFF2190
GFF2191 - Pca operon transcriptional activator PcaQ, at 246,863 to 247,864
GFF2191
GFF2192 - FIG00932626: hypothetical protein, at 247,865 to 248,299
GFF2192
Group
Condition
GFF2188
GFF2189
GFF2190
GFF2191
GFF2192
complex community
Community=Locust bean gum; Passage=4
+0.2
-3.6
-0.3
+0.5
-3.1
complex community
Community=arabino-guar; Passage=4
-0.1
-1.3
-0.7
-1.6
-2.2
complex community
Community=Locust bean gum; Passage=4
+0.1
-0.4
-0.3
-2.8
-1.7
complex community
Community=Kojac gum; Passage=4
+0.2
-2.4
-0.1
-0.2
-2.5
complex community
Community=Locust bean gum; Passage=4
+0.0
-0.6
-0.5
+0.6
-4.4
complex community
Community=guar; Passage=4
+0.0
-0.4
-0.2
-0.2
-2.9
complex community
Community=guar; Passage=4
-0.0
-1.4
-0.2
-0.2
-1.7
complex community
Community=arabino-guar; Passage=4
-0.2
-0.2
-0.5
-0.4
-2.2
complex community
Community=arabino-guar; Passage=4
+0.1
-1.1
-0.1
+0.5
-2.7
complex community
Community=guar; Passage=4
-0.1
-0.2
-0.4
-1.5
-1.0
complex community
Community=guar; Passage=4
-0.2
-0.1
-0.4
-0.9
-1.0
complex community
Community=arabino-guar; Passage=4
-0.4
-0.4
-0.2
-0.6
-0.9
phage
phage_bap4
-0.0
-0.2
-0.1
-0.6
-0.9
vitamin
M9 with calcium pantothenate 10 mg/mL
-0.2
-0.1
-0.1
-1.2
-0.0
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
-0.2
+0.2
-0.2
-0.3
-0.9
vitamin
M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL
-0.2
-0.7
+0.0
-0.2
-0.2
no phage control
no phage control
-0.0
-0.1
+0.1
-0.2
-1.0
phage
phage_bap4
-0.0
+0.1
-0.1
-0.2
-1.0
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-0.2
-0.5
-0.1
-0.5
+0.3
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
-0.1
-0.6
+0.0
+0.1
-0.3
phage
phage_bap4
-0.1
-0.2
+0.1
-0.1
-0.7
complex community
Community=Locust bean gum; Passage=4
+0.1
-0.0
-0.6
+0.7
-1.1
vitamin
M9 with Supernatant from Cyptococcus
+0.0
+0.3
-0.0
-1.3
+0.2
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-0.2
-0.4
+0.0
+0.2
-0.3
vitamin
M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL
-0.1
+0.1
-0.1
-0.9
+0.2
complex community
Community=Locust bean gum; Passage=1
-0.2
-0.4
+0.2
-0.8
+0.5
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
-0.1
+0.1
+0.0
+0.4
-1.0
complex community
Community=Kojac gum; Passage=1
-0.2
-0.5
+0.2
+0.2
+0.2
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
+0.1
+0.6
-0.0
+0.4
-0.9
phage
phage_bap4
-0.1
-0.5
+0.0
+0.6
+0.3
remove
GFF2188
plot
remove
GFF2189
plot
remove
GFF2190
remove
GFF2191
plot
remove
GFF2192
plot