Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF2187 and GFF2188 are separated by 160 nucleotidesGFF2188 and GFF2189 are separated by 68 nucleotidesGFF2189 and GFF2190 are separated by 17 nucleotidesGFF2190 and GFF2191 are separated by 104 nucleotides GFF2187 - ATPase associated with various cellular activities, AAA_5, at 243,631 to 244,485 GFF2187 GFF2188 - Putative periplasmic cytochrome type-C oxidoreductase signal peptide protein (EC 1.-.-.-), at 244,646 to 245,338 GFF2188 GFF2189 - Protocatechuate 3,4-dioxygenase alpha chain (EC 1.13.11.3), at 245,407 to 246,015 GFF2189 GFF2190 - Protocatechuate 3,4-dioxygenase beta chain (EC 1.13.11.3), at 246,033 to 246,758 GFF2190 GFF2191 - Pca operon transcriptional activator PcaQ, at 246,863 to 247,864 GFF2191
Group Condition GFF2187 GFF2188 GFF2189 GFF2190 GFF2191
complex community Community=arabino-guar; Passage=4 +0.1 -0.1 -1.3 -0.7 -1.6
complex community Community=Locust bean gum; Passage=4 +0.0 +0.1 -0.4 -0.3 -2.8
complex community Community=Locust bean gum; Passage=4 -0.1 +0.2 -3.6 -0.3 +0.5
complex community Community=Kojac gum; Passage=4 +0.3 +0.2 -2.4 -0.1 -0.2
complex community Community=guar; Passage=4 +0.2 -0.1 -0.2 -0.4 -1.5
complex community Community=arabino-guar; Passage=4 -0.4 -0.4 -0.4 -0.2 -0.6
vitamin M9 with calcium pantothenate 10 mg/mL -0.2 -0.2 -0.1 -0.1 -1.2
complex community Community=guar; Passage=4 +0.2 -0.0 -1.4 -0.2 -0.2
complex community Community=guar; Passage=4 +0.0 -0.2 -0.1 -0.4 -0.9
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.0 -0.2 -0.5 -0.1 -0.5
complex community Community=arabino-guar; Passage=4 -0.1 -0.2 -0.2 -0.5 -0.4
complex community Community=Locust bean gum; Passage=1 +0.0 -0.2 -0.4 +0.2 -0.8
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.1 -0.1 +0.1 -0.1 -0.9
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.1 -0.2 -0.7 +0.0 -0.2
vitamin M9 with Supernatant from Cyptococcus +0.0 +0.0 +0.3 -0.0 -1.3
phage phage_bap4 -0.0 -0.0 -0.2 -0.1 -0.6
complex community Community=Locust bean gum; Passage=4 -0.3 +0.0 -0.6 -0.5 +0.6
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.2 -0.1 -0.6 +0.0 +0.1
complex community Community=arabino-guar; Passage=4 -0.1 +0.1 -1.1 -0.1 +0.5
complex community Community=guar; Passage=4 +0.2 +0.0 -0.4 -0.2 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.1 -0.2 -0.4 +0.0 +0.2
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.1 -0.2 +0.2 -0.2 -0.3
complex community Community=Kojac gum; Passage=1 -0.0 -0.2 -0.5 +0.2 +0.2
complex community Community=Locust bean gum; Passage=4 -0.4 +0.1 -0.0 -0.6 +0.7
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.1 +0.0 -0.5 -0.1 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.0 -0.1 -0.1 -0.0 +0.5
phage phage_bap4 +0.2 -0.1 -0.5 +0.0 +0.6
phage phage_bap4 +0.3 -0.1 -0.2 +0.0 +0.5
phage phage_bap4 +0.2 -0.0 +0.1 -0.1 +0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 +0.1 +0.6 -0.0 +0.4
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