Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_11105	PS417_11110	PS417_11115	PS417_11120	PS417_11125
soil	soil sample 4; outgrowth in LB	N.D.	-0.5	-0.3	-1.0	+0.3
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	N.D.	+0.3	-0.6	-0.7	-0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	N.D.	+0.1	-0.2	-0.3	-1.0
phage	JP1 MOI 10	N.D.	-0.8	+0.3	+0.1	-0.6
liquid stress	Fraxetin 3 mM; liquid stress	N.D.	-0.2	-0.3	+0.4	-0.6
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	N.D.	+0.1	-0.8	+0.3	-0.3
stress	R2A with Fusaric 120 ug/mL	N.D.	-0.4	+0.2	+0.4	-0.8
nophagecontrol	Only library	N.D.	-0.1	+0.1	+0.5	-1.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	N.D.	-0.5	+0.4	+0.2	-0.6
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	N.D.	+0.3	-0.7	+0.3	-0.4
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	N.D.	-0.3	+0.6	+0.0	-0.7
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	N.D.	+0.6	+0.3	-0.7	-0.6
phage	P. simiae Grant Run MOI 0.1	N.D.	+0.6	-0.2	-0.6	-0.2
carbon source	L-Leucine (C)	N.D.	-0.5	+0.2	+0.5	-0.5
phage	JP1 MOI 10	N.D.	-0.4	+0.3	+0.3	-0.5
motility_chemotaxis	Method=Plug_approach; Chemical=None; Chemical_conc=0mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	N.D.	+0.4	+0.3	-0.0	-0.9
seeds	Growth on radish seeds for 24 hours	N.D.	+0.7	-0.3	+0.4	-0.9
agar plate interaction control	Parafilmed volatile agar plate with no fungus	N.D.	-0.7	+0.7	+0.3	-0.3
in planta	Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	N.D.	+0.5	-0.1	-1.2	+0.9
stress	methylglyoxal 0.032 vol%	N.D.	+0.4	-0.5	-0.3	+0.6
seeds	Growth on radish seeds for 72 hours	N.D.	+1.1	-0.1	-0.2	-0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	N.D.	+0.2	+0.6	+0.1	-0.7
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	N.D.	+0.7	-0.4	+0.4	-0.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	N.D.	+0.5	+0.4	+0.6	-0.4
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	N.D.	+0.1	-0.3	+0.3	+0.9
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	N.D.	+0.2	-0.3	+0.4	+1.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	N.D.	+0.4	+0.6	+0.8	-0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	N.D.	-0.2	+0.2	+1.3	+0.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	N.D.	+0.1	+0.6	+0.4	+0.4
carbon source	L-Valine (C)	N.D.	+0.3	+0.6	+0.8	+0.2