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Cofit
Protein
Homologs
Fitness for 5 genes in
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF2159 and GFF2160 are separated by 160 nucleotides
GFF2160 and GFF2161 are separated by 69 nucleotides
GFF2161 and GFF2162 are separated by 222 nucleotides
GFF2162 and GFF2163 are separated by 333 nucleotides
GFF2159 - Exodeoxyribonuclease VII large subunit (EC 3.1.11.6), at 3,956 to 5,305
GFF2159
GFF2160 - 'Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) / CBS domain' transl_table=11, at 5,466 to 6,932
GFF2160
GFF2161 - GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2), at 7,002 to 8,579
GFF2161
GFF2162 - Mobile element protein, at 8,802 to 9,092
GFF2162
GFF2163 - FIG01047222: hypothetical protein, at 9,426 to 9,617
GFF2163
Group
Condition
GFF2159
GFF2160
GFF2161
GFF2162
GFF2163
micoeukaryotes
Dictyostellum sp.mixed culture-1
N.D.
-1.8
N.D.
N.D.
-0.1
micoeukaryotes
Dictyostellum sp.mixed culture-2
N.D.
-1.9
N.D.
N.D.
+0.2
micoeukaryotes
C.elegans, mixed culture-2
N.D.
-1.9
N.D.
N.D.
+0.2
micoeukaryotes
Acanthamoeba sp., muxed culture-1
N.D.
-1.8
N.D.
N.D.
+0.0
phage
Ffm_phage 10 MOI; agar plate assay
N.D.
-2.1
N.D.
N.D.
+0.4
phage
6H2_phage 10 MOI; agar plate assay
N.D.
-2.1
N.D.
N.D.
+0.6
phage
LB_plus_SM_buffer with EIP16_phage 0.0875 MOI
N.D.
-1.9
N.D.
N.D.
+0.5
phage
LB_plus_SM_buffer with 6D2_phage 15 MOI
N.D.
-0.8
N.D.
N.D.
-0.6
phage
LB_plus_SM_buffer with Br60_phage 0.00005 MOI
N.D.
-1.3
N.D.
N.D.
-0.1
phage
LB_plus_SM_buffer with FelixO1_phage (wt new) 0.0075 MOI
N.D.
-1.2
N.D.
N.D.
+0.1
phage
LB_plus_SM_buffer with 6F2_phage 15 MOI
N.D.
+0.2
N.D.
N.D.
-1.0
micoeukaryotes
Acanthamoeba sp., muxed culture-2
N.D.
-1.1
N.D.
N.D.
+0.4
phage
phi19h1_phage 15 MOI
N.D.
-0.9
N.D.
N.D.
+0.2
phage
phi19h1_phage 15 MOI
N.D.
-0.7
N.D.
N.D.
+0.4
phage
LB_plus_SM_buffer with 6F2_phage 0.0001875 MOI
N.D.
-0.8
N.D.
N.D.
+0.4
phage
phi19h1_phage 15 MOI
N.D.
-0.8
N.D.
N.D.
+0.4
phage
LB_plus_SM_buffer with EIP16_phage 0.875 MOI
N.D.
-1.1
N.D.
N.D.
+0.8
phage
LB_plus_SM_buffer with Ffm_phage 0.001875 MOI
N.D.
-0.9
N.D.
N.D.
+0.7
nophagecontrol
No phage control
N.D.
-0.6
N.D.
N.D.
+0.4
phage
LB_plus_SM_buffer with FelixO1_phage 0.5 MOI
N.D.
+0.8
N.D.
N.D.
-0.9
phage
LB_plus_SM_buffer with Ffm_phage 1.875 MOI
N.D.
-0.7
N.D.
N.D.
+0.5
phage
LB_plus_SM_buffer with Ffm_phage 18.75 MOI
N.D.
-0.7
N.D.
N.D.
+0.6
phage
Br60_phage 15 MOI
N.D.
-0.7
N.D.
N.D.
+0.6
phage
LB_plus_SM_buffer with FelixO1_phage (wt_new) 2 MOI
N.D.
+0.5
N.D.
N.D.
-0.5
nophagecontrol
No phage control
N.D.
-0.4
N.D.
N.D.
+0.6
phage
6F2_phage 15 MOI
N.D.
-0.6
N.D.
N.D.
+0.8
phage
6F2_phage 15 MOI
N.D.
-0.3
N.D.
N.D.
+1.1
phage
LB_plus_SM_buffer with EIP16_phage 8.75 MOI
N.D.
+0.1
N.D.
N.D.
+1.1
phage
LB_plus_SM_buffer with 8C2_phage 15 MOI
N.D.
+1.4
N.D.
N.D.
+0.2
phage
LB_plus_SM_buffer with P22_phage 15 MOI
N.D.
+2.1
N.D.
N.D.
+0.0
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