Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF2158 and GFF2159 overlap by 4 nucleotidesGFF2159 and GFF2160 overlap by 1 nucleotidesGFF2160 and GFF2161 overlap by 4 nucleotidesGFF2161 and GFF2162 are separated by 46 nucleotides GFF2158 - Putative pre-16S rRNA nuclease YqgF, at 211,520 to 211,969 GFF2158 GFF2159 - Pyrimidine operon regulatory protein PyrR, at 211,966 to 212,463 GFF2159 GFF2160 - Aspartate carbamoyltransferase (EC 2.1.3.2), at 212,463 to 213,425 GFF2160 GFF2161 - Dihydroorotase (EC 3.5.2.3), at 213,422 to 214,711 GFF2161 GFF2162 - Acyl-CoA:1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51), at 214,758 to 215,504 GFF2162
Group Condition GFF2158 GFF2159 GFF2160 GFF2161 GFF2162
complex community Community=Locust bean gum; Passage=4 N.D. -0.7 -0.7 -0.6 -0.1
complex community Community=guar; Passage=4 N.D. -1.3 -0.6 +0.3 +0.1
complex community Community=guar; Passage=4 N.D. -0.5 -0.1 +0.0 -0.4
phage phage_bap4 N.D. -0.2 -0.3 -0.0 -0.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. -0.2 -0.0 -0.4 -0.3
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL N.D. -0.2 -0.1 -0.3 -0.3
complex community Community=Kojac gum; Passage=4 N.D. +0.0 -0.3 -0.2 -0.4
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL N.D. -0.3 -0.2 -0.2 -0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL N.D. -0.4 +0.1 -0.4 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL N.D. -0.3 -0.0 -0.2 -0.2
phage phage_bap4 N.D. -0.4 -0.0 +0.1 -0.2
vitamin M9 with Supernatant from Cyptococcus N.D. -0.6 +0.2 -0.1 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. +0.2 +0.2 -0.6 -0.3
phage phage_bap4 N.D. -0.1 +0.1 +0.0 -0.5
complex community Community=arabino-guar; Passage=4 N.D. +0.1 -0.4 -0.6 +0.4
complex community Community=Locust bean gum; Passage=4 N.D. +0.1 -0.6 +0.0 +0.2
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL N.D. -0.4 +0.2 -0.0 -0.1
vitamin M9 with Supernatant from Cyptococcus N.D. -0.3 +0.3 -0.1 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. +0.2 +0.2 -0.4 -0.2
no phage control no phage control N.D. +0.2 -0.1 +0.1 -0.3
vitamin M9 with Supernatant from Cyptococcus N.D. +0.0 +0.4 -0.2 -0.2
vitamin M9 with Supernatant from Cyptococcus N.D. -0.2 +0.4 -0.2 -0.0
complex community Community=Locust bean gum; Passage=4 N.D. -0.2 -0.1 +0.5 -0.1
complex community Community=guar; Passage=4 N.D. -0.0 -0.3 +0.6 -0.1
phage phage_bap4 N.D. -0.1 -0.2 -0.2 +0.8
phage phage_bap4 N.D. -0.3 -0.2 -0.0 +0.8
complex community Community=Locust bean gum; Passage=4 N.D. +0.3 -0.5 +0.1 +0.4
phage phage_bap4 N.D. +0.2 -0.2 -0.3 +0.9
complex community Community=arabino-guar; Passage=4 N.D. -0.1 +0.1 +0.4 +0.2
phage phage_bap4 N.D. -0.1 +0.1 +0.2 +0.9
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