Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF213 and GFF214 are separated by 99 nucleotidesGFF214 and GFF215 are separated by 15 nucleotidesGFF215 and GFF216 are separated by 13 nucleotidesGFF216 and GFF217 are separated by 86 nucleotides GFF213 - tmRNA-binding protein SmpB, at 238,538 to 239,014 GFF213 GFF214 - Putative transmembrane protein, at 239,114 to 239,494 GFF214 GFF215 - RNA polymerase sigma-54 factor RpoN, at 239,510 to 240,025 GFF215 GFF216 - Transmembrane regulator protein PrtR, at 240,039 to 240,863 GFF216 GFF217 - Orf21; putative lipoprotein, at 240,950 to 241,333 GFF217
Group Condition GFF213 GFF214 GFF215 GFF216 GFF217
complex community Community=guar; Passage=4 -3.1 -0.1 -1.5 -0.4 -0.3
complex community Community=Locust bean gum; Passage=4 -2.7 +0.0 -2.1 -0.2 +0.0
complex community Community=arabino-guar; Passage=4 -3.2 -0.1 -0.1 -0.4 +0.1
complex community Community=arabino-guar; Passage=4 -2.7 +0.3 -0.4 -0.7 -0.1
complex community Community=Locust bean gum; Passage=4 -3.1 -0.4 +0.1 -0.2 +0.0
complex community Community=arabino-guar; Passage=4 -3.4 +0.2 -0.4 +0.1 -0.0
complex community Community=guar; Passage=4 -3.3 +0.7 -0.0 -0.8 +0.2
complex community Community=arabino-guar; Passage=4 -2.8 +0.6 -0.8 -0.2 -0.0
complex community Community=guar; Passage=4 -2.7 -0.2 +0.0 -0.1 +0.1
complex community Community=Locust bean gum; Passage=4 -2.6 +0.2 +0.1 -0.1 -0.4
complex community Community=Kojac gum; Passage=4 -3.0 -0.1 +0.5 -0.2 +0.2
complex community Community=guar; Passage=4 -2.4 -0.1 +0.0 -0.1 +0.2
complex community Community=Locust bean gum; Passage=4 -2.5 -0.1 +0.7 +0.4 -0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -1.0 -0.1 +0.0 -0.0 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL -0.4 -0.0 -0.7 -0.1 +0.1
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -1.4 -0.1 +0.6 -0.1 -0.0
phage phage_bap4 -1.0 +0.1 -0.3 +0.1 +0.2
no phage control no phage control -1.1 +0.2 -0.1 +0.1 -0.1
vitamin M9 with Supernatant from Cyptococcus -0.6 +0.1 -0.3 -0.0 -0.0
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.9 +0.3 -0.2 +0.1 +0.0
no phage control no phage control -1.0 +0.4 +0.0 +0.1 -0.1
phage phage_bap4 -0.9 +0.2 +0.2 +0.0 +0.1
phage phage_bap4 -0.7 +0.2 +0.1 +0.1 -0.0
no phage control no phage control -0.7 +0.4 +0.1 +0.2 +0.1
complex community Community=Kojac gum; Passage=1 -0.3 +0.1 +0.4 -0.2 +0.1
vitamin M9 with Supernatant from Cyptococcus -0.4 +0.1 +0.4 +0.1 -0.0
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.4 +0.2 +0.4 +0.1 -0.0
phage phage_bap4 -0.4 +0.2 +0.3 +0.2 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL -0.2 -0.1 +0.6 -0.0 +0.1
phage phage_bap4 -0.5 +0.2 +0.1 +0.3 +0.2
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