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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Hydrogenophaga sp. GW460-11-11-14-LB1
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF2143 and GFF2144 are separated by 65 nucleotides
GFF2144 and GFF2145 are separated by 11 nucleotides
GFF2145 and GFF2146 are separated by 22 nucleotides
GFF2146 and GFF2147 overlap by 1 nucleotides
GFF2143 - ABC transporter substrate-binding protein, at 1,031,833 to 1,033,095
GFF2143
GFF2144 - High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1), at 1,033,161 to 1,034,036
GFF2144
GFF2145 - ABC transporter ATP-binding/permease protein, at 1,034,048 to 1,036,582
GFF2145
GFF2146 - hypothetical protein, at 1,036,605 to 1,036,994
GFF2146
GFF2147 - Aldehyde dehydrogenase (EC 1.2.1.3), at 1,036,994 to 1,038,454
GFF2147
Group
Condition
GFF2143
GFF2144
GFF2145
GFF2146
GFF2147
carbon source
Ying_OrganicAcid7 rep A; time point 1
-0.9
-0.1
+0.0
+0.1
N.D.
carbon source
Ying_OrganicAcid7 rep A; time point 3
-0.2
+0.0
-0.5
-0.1
N.D.
carbon source
Ying_sugar7 rep C; time point 3
-0.5
+0.1
-0.2
+0.0
N.D.
carbon source
Ying_AminoAcid20 rep B; time point 3
-0.2
-0.1
-0.2
+0.1
N.D.
carbon source
Ying_AminoAcid20 rep C; time point 3
+0.1
-0.4
-0.3
-0.0
N.D.
carbon source
Ying_OrganicAcid7 rep C; time point 3
-0.2
-0.1
-0.3
+0.2
N.D.
carbon source
Ying_OrganicAcid7 rep B; time point 1
-0.1
-0.5
+0.1
+0.0
N.D.
carbon source
Ying_Others16 rep A; time point 3
-0.3
+0.2
-0.4
-0.1
N.D.
carbon source
Ying_sugar7 rep A; time point 3
-0.2
-0.2
-0.1
+0.2
N.D.
carbon source
Ying_all64 rep A; time point 3
-0.4
-0.1
-0.1
+0.2
N.D.
carbon source
Ying_sugar7 rep B; time point 3
+0.3
-0.3
-0.1
-0.0
N.D.
carbon source
Ying_OrganicAcid7 rep C; time point 2
-0.3
+0.1
+0.1
+0.2
N.D.
carbon source
Ying_all64 rep C; time point 3
+0.2
-0.4
+0.2
+0.1
N.D.
carbon source
Ying_AminoAcid20 rep C; time point 2
+0.2
-0.3
-0.0
+0.2
N.D.
carbon source
Ying_OrganicAcid7 rep B; time point 3
-0.3
+0.4
-0.2
+0.1
N.D.
carbon source
Ying_Nucleobase14 rep A; time point 2
+0.3
-0.4
+0.1
+0.2
N.D.
carbon source
Ying_AminoAcid20 rep A; time point 1
+0.3
-0.3
+0.0
+0.2
N.D.
carbon source
Ying_all64 rep B; time point 1
+0.1
+0.4
-0.1
-0.1
N.D.
carbon source
Ying_Others16 rep C; time point 2
+0.5
-0.2
+0.2
-0.1
N.D.
carbon source
Ying_Others16 rep A; time point 2
+0.2
-0.4
+0.4
+0.3
N.D.
carbon source
Ying_Nucleobase14 rep B; time point 2
+0.2
-0.1
+0.1
+0.3
N.D.
carbon source
Ying_AminoAcid20 rep B; time point 2
+0.3
+0.2
-0.1
+0.1
N.D.
carbon source
Ying_Others16 rep B; time point 2
+0.2
+0.1
-0.1
+0.3
N.D.
carbon source
Ying_sugar7 rep C; time point 1
+0.4
-0.0
-0.0
+0.3
N.D.
carbon source
Ying_AminoAcid20 rep C; time point 1
+0.5
+0.3
-0.1
+0.0
N.D.
carbon source
Ying_sugar7 rep B; time point 2
+0.5
+0.0
+0.1
+0.2
N.D.
carbon source
Ying_Nucleobase14 rep B; time point 1
+0.2
+0.3
+0.1
+0.2
N.D.
carbon source
Ying_all64 rep C; time point 2
+0.7
-0.2
+0.3
+0.0
N.D.
carbon source
Ying_OrganicAcid7 rep B; time point 2
+0.4
+0.1
+0.2
+0.2
N.D.
carbon source
Ying_Nucleobase14 rep C; time point 1
+0.3
+0.5
+0.1
+0.2
N.D.
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