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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF2142 and GFF2143 are separated by 41 nucleotides
GFF2143 and GFF2144 are separated by 27 nucleotides
GFF2144 and GFF2145 are separated by 12 nucleotides
GFF2145 and GFF2146 are separated by 48 nucleotides
GFF2142 - tRNA-Asp-GTC, at 2,174,124 to 2,174,200
GFF2142
GFF2143 - UPF0118 membrane protein SMc00793, at 2,174,242 to 2,175,396
GFF2143
GFF2144 - hypothetical protein, at 2,175,424 to 2,175,549
GFF2144
GFF2145 - hypothetical protein, at 2,175,562 to 2,176,032
GFF2145
GFF2146 - Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168), at 2,176,081 to 2,177,376
GFF2146
Group
Condition
GFF2142
GFF2143
GFF2144
GFF2145
GFF2146
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
N.D.
-0.8
-0.0
+0.3
-0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
N.D.
-0.3
-0.1
-0.3
-0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
N.D.
-0.2
-0.3
-0.0
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
N.D.
-0.0
-0.6
+0.2
-0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
N.D.
-0.2
-0.1
-0.1
+0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
N.D.
+0.0
-0.2
+0.0
+0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
N.D.
-0.3
+0.3
-0.1
+0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
N.D.
-0.3
+0.0
+0.2
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
N.D.
+0.1
-0.0
-0.1
-0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
N.D.
+0.0
+0.0
-0.1
-0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
N.D.
-0.2
+0.2
+0.1
-0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
N.D.
-0.1
+0.2
+0.0
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
N.D.
-0.1
+0.3
+0.1
-0.3
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
N.D.
-0.2
+0.0
+0.2
-0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
N.D.
+0.1
+0.2
-0.3
+0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
N.D.
-0.1
-0.0
+0.4
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
N.D.
-0.1
+0.2
+0.1
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
N.D.
+0.1
+0.1
+0.0
-0.0
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